Prochlorococcus marinus subsp. marinus CCMP1375: Pro_0984
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Entry
Pro_0984 CDS
T00137
Symbol
recJ
Name
(GenBank) Single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pma
Prochlorococcus marinus subsp. marinus CCMP1375
Pathway
pma03410
Base excision repair
pma03430
Mismatch repair
pma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pro_0984 (recJ)
03430 Mismatch repair
Pro_0984 (recJ)
03440 Homologous recombination
Pro_0984 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pma03400
]
Pro_0984 (recJ)
DNA repair and recombination proteins [BR:
pma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Pro_0984 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Pro_0984 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Pro_0984 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AAQ00029
UniProt:
Q7VBV8
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All DBs
Position
901954..903834
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AA seq
626 aa
AA seq
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MSNLTWEIPKHIDFHSIEYDYLGTIIKEILYRRGFQSKSDIQNFIEPSKPPNALFHFPFL
NIASERVISAIKNHEEIAICGDYDADGMTSTALLIDVLTKLNAKPIPLIPSRQDDGYGLN
KAIIDKIVALNINLLITVDNGVSAIEELKYAKSLGIDVIVTDHHKINHQLNDAFALIHPE
TTPEKSPYRSIAGVGVTYILAEDIAKKLNKEEILNLSKDLLCIGTIADMSKLEGANRYWL
KHWIYKLKDSTSLGLQAIYKNSKLNNLQIKTNDISFKIAPRINSIGRIDDPKLILDLLIE
KDQSKVDHMANRCEEINRLRKKLCLIVEKEALNILEKKDAQIDSFILLAQGHWNHGVIGI
VASRIMNKYLRPTAILSSEGEGLLRASVRSPKNFHVTEALGKCSDLLEKYGGHAAAAGFT
VKASNLMALEKKLNSIAETWLSQNEVAKISPEARIDFSQINDELLGDLKKLEPFGIGNQK
PLFWTNSCEVTKYRIGYFGELRISLKNADISFDAIKWEFSKKDINLPKTINIAFNIDIST
KQDKDIVCLNIVDFVPDFKIKKFRLNQRIYSCEENVNKTISIYNKDNQKILCDIQSKSKF
IDCIKDLHPYTIVIIKEAMTVLGIKL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaaaccttacctgggaaataccaaaacatatagattttcactctatagaatatgat
tatttaggaacaattataaaagagatactttaccgcagaggttttcagagcaagtcagat
attcagaactttattgagccaagcaaaccaccaaacgctctcttccattttccatttcta
aacatagcttcagagcgagtaataagtgcgataaaaaatcatgaagaaatagcaatttgt
ggtgattacgatgctgatggaatgacaagtacagcattacttatagatgtactaactaaa
ttaaatgcaaaacctataccgttgattccttctaggcaagatgatggttatggactaaat
aaagctataatagataagatagtagccttaaatataaatttactaattacagtagataat
ggtgtatcagcaatagaagaacttaagtacgccaaaagtcttggtatagatgtcatagtt
acagatcaccacaaaataaatcatcaacttaatgacgcatttgctctgatacatcctgag
actacacctgagaaatcaccttacagatcaattgcaggagtaggtgttacgtatatactg
gctgaagatatagcaaaaaagttaaataaggaagaaattctaaatttatcgaaagactta
ttatgtataggaacgattgctgatatgtctaaattagaaggtgctaatagatattggtta
aaacattggatatataaacttaaggattcaacaagtttaggtttacaagcaatctacaaa
aatagcaaactaaataatctgcaaataaaaactaatgacattagcttcaaaatagctccc
cgaattaattcaataggacgaatcgatgacccaaaattgattcttgatttgttaatagaa
aaagatcaatcaaaggttgatcacatggcaaataggtgtgaggagattaataggcttagg
aaaaaactttgcttaattgtagaaaaagaagccttgaatattcttgaaaagaaagatgcc
caaatagattcttttattttacttgctcaaggtcattggaatcatggggtaataggcata
gtcgcttcaagaattatgaataaatatttaaggcctacagctatcctttcaagtgaagga
gaagggctattaagggcatcagttagatcaccaaaaaactttcatgtcactgaagcactt
gggaaatgctcagatttgttagagaaatatggaggtcatgctgctgcagctggttttact
gtcaaagcttctaatctaatggcgctcgaaaaaaaactaaattcaatagctgaaacctgg
ttgagccaaaacgaagtagccaaaatctcgccagaagcacgtatagatttctcacaaatt
aatgatgaattattaggtgatctgaagaaactagagccttttggtattggtaatcaaaag
ccattattttggactaactcatgtgaagtaactaaatatagaattggatattttggagag
ttaagaattagccttaagaatgcagatattagctttgatgcaatcaaatgggaattctct
aaaaaagatattaatttgcccaaaacaataaatatagcctttaatattgatatttcaact
aagcaagataaagatatagtttgtttaaacatagttgactttgtccctgattttaaaatt
aagaaatttagattaaatcaaaggatatattcttgtgaggaaaatgtaaataaaacaatc
agtatttataacaaggataatcaaaagattctttgtgatattcaatcaaaaagtaaattc
atcgattgtattaaggatttgcatccctacacaatagtcatcataaaggaggcaatgact
gtccttgggatcaaactctaa
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