Prochlorococcus marinus subsp. marinus CCMP1375: Pro_1307
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Entry
Pro_1307 CDS
T00137
Symbol
pnp
Name
(GenBank) Ribonuclease PH
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pma
Prochlorococcus marinus subsp. marinus CCMP1375
Pathway
pma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pro_1307 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pma03019
]
Pro_1307 (pnp)
03016 Transfer RNA biogenesis [BR:
pma03016
]
Pro_1307 (pnp)
Enzymes [BR:
pma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Pro_1307 (pnp)
Messenger RNA biogenesis [BR:
pma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Pro_1307 (pnp)
Transfer RNA biogenesis [BR:
pma03016
]
Prokaryotic type
tRNA degradation factors
Pro_1307 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
OB_RRP5_4th
KH_KhpA-B
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AAQ00351
UniProt:
Q7VAZ5
LinkDB
All DBs
Position
1206287..1208455
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AA seq
722 aa
AA seq
DB search
MQGQTTSVSFDGREIRLTTGRYAPQAGGSVLIECGDTAVLVTATQGQGREGADFLPLSCD
YEERLYAAGRIPGSFMRREGRPPERATLISRLIDRPLRPLFPNWMRDDIQVVATCLSLDE
RVPADILAVTGSSMATLLAGIPFYGPMAAVRVGLLGDDFVLNPSFREIERGDLDLVVAGT
PDGVVMVEAGSNQLTEQDVIEAIDFGYEAVNELIKAQESILKDSGLTQIKPEKPDLDETV
PSYLEKNCTKPISALLKEFDLSKEDRDLKLDEIKTNCAEKIDSLKDDNAVKKSITTNTKL
LGISFKALTKKLMREQIIKDGKRVDGRALDEVREISAEAGILPKRVHGSGLFQRGLTQVL
STATLGTPSDAQEMDDLNPSPDKTYIHHYNFPPYSVGETRPMRTPGRREVGHGALAERAI
IPVLPPKESFPYVLRVVSEVLSSNGSTSMGSVCGSTIALLDAGVPLKAPVSGAAMGLIKE
GEEVRILTDIQGIEDFLGDMDFKVAGTEKGITALQMDMKMTGLPIKIIGEAINQAKPART
HILEKMVQAIDKPRETLSPHAPRLLSFRIDPELIGTVIGPGGRTIKGITERTNTKIDIED
GGIVTIASHDGVAAEEAQKIIEGLTRKVHEGEVFTGSITRIIPIGAFVEILPGKEGMIHI
SQLSEARVEKVEDVVKVGDEVTVRVREIDNRGRINLTLRGIPQNGDMQYYPQPTPTPVAP
LM
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaggtcagacaacgtcggtctctttcgatggtcgagaaatacggctcacaacaggg
agatatgcaccacaggctggtggttcagtattgattgaatgtggtgacacagcagtctta
gtaacagcaacccaagggcaagggagagaaggagctgatttccttcctcttagttgcgac
tacgaagagaggctttatgcggctggtcgaattcctggaagtttcatgaggcgagaagga
agacctcctgaaagagcaactttaatctcaagattgatagatcgtcctctcagacctctt
tttcccaattggatgagagatgatatccaagttgttgctacttgtctttcactagatgaa
agagtgcctgccgatattttagctgtaacaggctcatcaatggcaacactccttgctgga
attccattttatggacctatggccgctgttagagttggtttattaggggatgactttgtc
ttaaatccaagcttcagagaaatcgagcgaggagacttagatttagtagttgctggaact
cctgatggagttgtaatggttgaagcaggatctaatcaactaactgaacaagatgtaatt
gaggcaattgactttggctatgaagcagttaatgaattgattaaagctcaggaatctatt
ctgaaagactcaggtctaactcaaatcaaacctgaaaagccagacttggatgaaacagta
ccttcctatttagaaaaaaactgtacaaaaccaattagtgcattattaaaagaattcgat
ctttccaaagaagacagagatttaaagcttgatgaaatcaaaactaattgtgcagaaaaa
attgattctcttaaagatgacaatgcagtcaagaaatcaataacaactaatacaaaacta
ttaggaataagcttcaaagctcttactaaaaaactaatgagagagcaaattatcaaagat
ggaaaaagagtagatggaagagcacttgatgaagtaagagagatatccgccgaagctggt
attcttccaaaacgtgttcatggatctggtctgtttcaaagagggttaacccaggtactt
tccacagcaacactaggaacacctagtgatgctcaagaaatggatgatctaaacccaagt
cccgataaaacatatatacatcactataatttccctccttactcagtaggcgaaacaaga
cctatgcgtaccccaggacgccgcgaagttggtcatggcgctttagcggaacgagcaatt
atcccagttttgcctcctaaagagtccttcccttatgtcttacgagtagtaagtgaggtt
ttaagctcaaatggctctacctcaatgggatctgtttgtggtagcacaattgcactcctt
gatgcaggagtcccacttaaagcacctgtaagcggagctgctatgggccttattaaggaa
ggagaagaagtaagaatactcactgacattcaaggaattgaagactttttgggagatatg
gatttcaaagtcgcaggtacagaaaaaggtattactgctcttcaaatggatatgaaaatg
acaggcctacctataaaaataattggagaagcaataaatcaagcgaagcctgcaagaact
catattctagaaaaaatggttcaagctattgacaaaccaagagagactctttctcctcat
gcaccacggcttctaagcttcagaatagaccctgaacttattggaacagttattggacct
ggtggaagaactatcaaaggtataactgaaagaacaaatacaaaaatagatatagaagat
ggcggaattgtaaccattgcatcacatgatggagttgcagcagaagaagctcagaagata
attgaaggtctaaccaggaaagttcatgagggagaagtatttacaggctcaattacaagg
attatccctattggtgcatttgttgaaatccttccaggcaaagaaggaatgatacatatt
tctcaattatcagaagccagagtagagaaagttgaagatgttgtcaaagtaggtgatgaa
gtaactgtaagggttagagaaatagataatcgaggcagaatcaatctaactctaaggggt
attccacaaaatggagacatgcaatattatccacagccaacccccactccagtagcacct
ttgatgtaa
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