Prochlorococcus marinus subsp. marinus CCMP1375: Pro_1639
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Entry
Pro_1639 CDS
T00137
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' subunit/160 kD subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pma
Prochlorococcus marinus subsp. marinus CCMP1375
Pathway
pma03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pro_1639 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pma03021
]
Pro_1639 (rpoC)
03400 DNA repair and recombination proteins [BR:
pma03400
]
Pro_1639 (rpoC)
Enzymes [BR:
pma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pro_1639 (rpoC)
Transcription machinery [BR:
pma03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Pro_1639 (rpoC)
DNA repair and recombination proteins [BR:
pma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Pro_1639 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Fas_alpha_ACP
Pkinase_fungal
Motif
Other DBs
NCBI-ProteinID:
AAQ00683
UniProt:
P42076
LinkDB
All DBs
Position
complement(1494174..1496078)
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AA seq
634 aa
AA seq
DB search
MTNSNLRTENHFDYVKITLASPERVMSWGQRTLPNGQVVGEVTKPETINYRTLKPEMDGL
FCEKIFGPSKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFINLAAPVSHVWY
LKGIPSYVAILLDMPLRDVEQIVYFNCYVVLDEGDHKDLKYKQLLTEDEWLEVEDEIYAE
DSTIENEPVVGIGAEALKQLLEDLDLQEVAEQLREEITGSKGQKRAKLIKRLRVIDNFIA
TNARPEWMVLNAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPE
IIVRNEKRMLQEAVDALVDNGRRGRTVVGANNRALKSLSDIIEGKQGRFRQNLLGKRVDY
SGRSVIVVGPKLKMHQCGLPKEMAIELFQPFVIHRLIRQNIVNNIKAAKKLIQRADDEVM
QVLQEVIEGHPILLNRAPTLHRLGIQAFEPKLVAGRAIQLHPLVCPAFNADFDGDQMAVH
VPLAIEAQTEARMLMLASNNILSPATGEPIVTPSQDMVLGSYYLTALQPDAVKPDFGDQS
KTFAGLEDVIHAFEDKRINLHDWVWVRFNGEVEDDDELTSPLDTQILEDGTQIQQWTYRR
DRLDEEGALISRFLLTTVGRVVMNNTIIDAVASG
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgactaacagcaatttaagaacagagaatcattttgattatgtcaaaattactttggct
tctcctgaaagagttatgtcttggggacaacgtactctacctaatggtcaagttgttggt
gaagttacaaagccagaaactattaattaccgtactttgaagccagaaatggatggcctt
ttctgtgagaaaatatttggtccttcaaaagattgggagtgtcattgcggtaaatacaaa
agagtaagacatcgcggaattgtttgtgagcgttgtggtgttgaagttacagaaagcaga
gtacgtcgccatagaatgggattcattaatttagctgctcctgtctcacatgtttggtat
ttaaagggtattcctagttatgtggctattttgctggacatgccacttcgtgatgttgag
caaattgtttacttcaattgttatgtagtacttgatgaaggtgatcataaagatcttaag
tacaaacaattactcacggaagatgaatggcttgaagtggaagatgaaatctatgctgaa
gactctactattgaaaatgagcctgtagtaggtataggagcagaagccttaaagcaatta
ttagaagatcttgatttgcaggaggttgctgaacaattgcgtgaagagattactggtagc
aaaggacagaaaagagcaaaactaataaagagattgagagtaattgataatttcattgca
actaatgcccgcccagaatggatggttctaaatgcaataccagttattcctccagatctt
cggcctatggttcaattagatgggggccgatttgccacctctgatttaaatgatttatat
agacgagtaattaataggaataatcgtttagcaagacttcaggaaatattggcccctgag
attattgtacgaaatgaaaagaggatgcttcaggaagctgttgatgctcttgttgataat
gggagaagaggaagaacagttgttggggcaaataatcgagccttgaaatctttgagtgac
attattgaaggtaagcaaggaagatttaggcaaaaccttttaggtaagagagttgattat
tcaggtagatcagtaatagtggtaggccccaaattgaaaatgcatcaatgtggtctacca
aaggagatggcaatagagcttttccagcctttcgtaattcatagattaattcgtcaaaac
attgtcaataacattaaggctgcaaagaaattgattcaacgtgcagatgatgaggtgatg
caggttttgcaagaggttatagaagggcatccaattttgttaaacagagctcctaccttg
catcgtctaggtattcaagcttttgaaccgaaattagttgcaggtagagcaattcaatta
catccattggtttgtccagcatttaatgctgattttgatggagatcaaatggctgtgcac
gtcccactagcaattgaggcacaaactgaggcaagaatgctaatgcttgctagcaataat
attctttctcctgcgactggggaaccaatagtgacaccatctcaagatatggttcttggt
tcttattatttaactgctttgcaaccagatgcagttaagccagattttggagatcaatct
aaaaccttcgctggcttagaagatgtaattcatgctttcgaagataaaagaatcaatctt
catgattgggtatgggttcgttttaatggggaagtagaagatgatgatgaattgacttct
cctctagatacacaaattctggaagatggtactcagattcaacaatggacttatcgacga
gatcgcctagatgaagaaggcgctttaattagccgctttctccttacaacagtcggacgt
gtagtaatgaacaacaccattattgatgctgtagcttcaggctga
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