Prochlorococcus marinus subsp. marinus CCMP1375: Pro_1740
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Entry
Pro_1740 CDS
T00137
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pma
Prochlorococcus marinus subsp. marinus CCMP1375
Brite
KEGG Orthology (KO) [BR:
pma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pma03016
]
Pro_1740 (rnd)
Enzymes [BR:
pma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Pro_1740 (rnd)
Transfer RNA biogenesis [BR:
pma03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Pro_1740 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
BE_C
Motif
Other DBs
NCBI-ProteinID:
AAQ00784
UniProt:
Q7V9T4
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All DBs
Position
1593460..1594104
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AA seq
214 aa
AA seq
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MSSFAKKPASFKVFETDLDDQWTQHFSTQSCLAIDTEAMGLIHGRDRLCLVQICDEQDNV
ACIKIQQHQTKANNLQSLMEDSAIEKVFHYARFDVAAISCNLNIAVNSIFCTKLASKIGR
TYSPRHGLKEVILELVGIELDKQAQSSDWGRVGELTEKQLEYATNDVRYLIQARNQLEKM
LIREDRWELTKRCFECISVMSELDIRRFHNIFEH
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagctttgccaaaaagccagccagttttaaggtctttgagactgaccttgatgat
caatggacgcaacatttttccacacaatcctgcttagctatagatacagaagcgatgggt
cttatacatggtcgtgatcgactttgtctagttcaaatctgcgatgagcaagataatgtt
gcttgtataaaaatccaacaacaccaaacaaaagcaaataatctccaatcattaatggaa
gattccgctattgagaaagtattccattatgcaagatttgatgtagctgctatttcatgc
aatctcaatattgctgtaaattcaatattctgcacaaaattagcgagcaaaattgggagg
acatattcccctaggcatggattaaaagaagtgattttggaacttgttggaatagaacta
gataaacaagctcaaagtagcgattggggaagagttggtgagctaacagaaaagcaacta
gaatacgctactaatgatgttcgctatcttattcaagcaagaaatcaattagaaaaaatg
ttaatcagagaagacaggtgggagctaacaaaacggtgttttgaatgtatatcggtcatg
tcagaattagacatcagacgttttcacaatatttttgaacattaa
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