Prochlorococcus marinus subsp. marinus CCMP1375: Pro_1807
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Entry
Pro_1807 CDS
T00137
Symbol
holA
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pma
Prochlorococcus marinus subsp. marinus CCMP1375
Pathway
pma03030
DNA replication
pma03430
Mismatch repair
pma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pro_1807 (holA)
03430 Mismatch repair
Pro_1807 (holA)
03440 Homologous recombination
Pro_1807 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pma03032
]
Pro_1807 (holA)
03400 DNA repair and recombination proteins [BR:
pma03400
]
Pro_1807 (holA)
Enzymes [BR:
pma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pro_1807 (holA)
DNA replication proteins [BR:
pma03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pro_1807 (holA)
DNA repair and recombination proteins [BR:
pma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pro_1807 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
ERCC4
Motif
Other DBs
NCBI-ProteinID:
AAQ00851
UniProt:
Q7V9M3
LinkDB
All DBs
Position
1660814..1661830
Genome browser
AA seq
338 aa
AA seq
DB search
MPIHLIWGDDFGAIDRSIEKFIKKAIDPNWISINLSRLDGQNASEAHKCLEEVRTPPFGN
GHRIVIVKKSPFCNGCSNELSNHFESIINLIPEQTHLILVNQNKPDGRLKTTKLLNNLIK
SKKAFEQRFILPPAWDGLGQKKLVERTAEEMNIELTEDAILTLVEALGSDSQRIAIELEK
LVLLEEAKTNQKEGEKIIISQESVNDLIHSISSNSLQICEFLLKSNFGKAIEKIDYLLNE
GEPALRILATMTSQIRGWLWVSLLDQGENKEVSSIAKQAGIANPKRIYVIRKQIQGKSPM
FFIELLSRILEIEALLKKGALPKHAFRDGLVTKSDLIV
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgccaatacatttgatatggggtgatgattttggtgcgattgatagatcaatcgaaaaa
tttattaaaaaagccattgatcctaattggataagcatcaatttgagccgtttagacggt
caaaatgcttcagaagcacataaatgtcttgaagaagtccggacacctccatttgggaat
ggtcaccgaatcgttattgttaagaaaagtccattttgcaatggatgctctaatgaatta
tctaatcacttcgaaagcataattaatttaattccagaacagacccatctcatacttgtc
aatcaaaataagcctgatggtcgattaaaaacgacaaaattgctcaataatttaattaaa
tccaaaaaagcgtttgaacaacgatttatattgcctccagcctgggacggattaggccaa
aaaaaattggttgaaagaactgctgaagaaatgaatatagagctcacggaagatgcaatt
ttgactcttgtagaagcgcttggtagcgacagtcaaaggattgcaattgaacttgaaaaa
ctggttttattggaagaagcaaaaactaatcaaaaagaaggggagaaaattattatcagt
caagaatcagttaatgatctaattcacagtatttctagtaactcattacaaatttgtgaa
ttccttttaaaaagcaattttgggaaagctattgaaaaaatagattaccttttaaatgaa
ggagaaccagctcttaggatactcgcaacaatgacctcgcaaattagaggttggctttgg
gtctctcttcttgatcaaggagaaaacaaagaagtttcttctattgctaaacaagcagga
attgccaatccaaaacgaatttatgtaatccgcaaacaaattcaagggaaatctcctatg
ttttttattgaacttcttagcagaatattggaaatagaagcattattaaaaaaaggagct
ttacctaagcatgcttttcgagatggcctagtcacaaaatctgatttaatcgtctaa
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