Pseudoalteromonas marina: CPA52_01545
Help
Entry
CPA52_01545 CDS
T06578
Name
(GenBank) signal peptide prediction
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pmaa
Pseudoalteromonas marina
Pathway
pmaa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pmaa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CPA52_01545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmaa02000
]
CPA52_01545
Transporters [BR:
pmaa02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CPA52_01545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
ATG57003
LinkDB
All DBs
Position
complement(348940..350202)
Genome browser
AA seq
420 aa
AA seq
DB search
MDSPKRSTLKKLAAIGLTAGAITHVPYVFARNKVTIRVLGTHVTLQDAIRKQAMSDLGIN
IEFTPAGSAAVLQRASMDPSSFDLYEQWSNSINVLWNAGSIQPIEKKRLTYFNEINSLTK
TGKLSEDANIGAGDAPFKILNVQPDGTLSEQESDLISFLPYVHNVDSFGYNTKFIKPGIA
YETESWGWLLDEQHRGKVGIVNAPTIGLFDLALAAKAKGLVKINNIGAMTRIELDNLFKV
LLDYKRQGHFSGYWNSVPESVQYMKDERVHIESMFSPAVSALNGQGINVRFAAPKEGYRG
WHGVMCLSSQTHDSVKDASYDYMNWWLSGWPGAFIARQGYYISNPQRSKPLLSQNEWDYW
YDGKIANTDLLETNGNIAVRKGEQRNGGSYTKRFSNVAVWNTVMPTYDYSLQKWYELISR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggactctccaaaacgctcaacacttaaaaagcttgcagctataggcttaactgcaggc
gctataacgcatgttccttatgtttttgctcgtaacaaggtcacaataagagtgcttggc
acacatgtaaccttacaggacgcaattcgtaagcaagccatgagtgatttaggcattaat
attgaatttacgcccgctggtagtgccgctgttttgcaaagagcctcaatggaccccagc
tcatttgatttatacgagcagtggtcaaacagtattaatgtgttgtggaatgcaggctca
atacaacccatagaaaaaaaacgccttacttattttaacgaaataaatagccttacaaaa
acaggaaagttatcagaagatgccaatattggtgcaggtgacgctccctttaaaatatta
aacgtacaacccgatggcacactcagtgagcaagaaagcgacttaataagctttttaccc
tacgtgcacaatgtagactcctttggttataacactaaatttattaaacccggaattgcc
tatgaaactgaaagttggggatggttactggatgagcaacacagaggaaaagtaggtatt
gtaaatgcgcctactattggtttatttgacttagcgcttgctgctaaagctaaagggctt
gtgaaaattaacaatataggggcaatgactcgtattgagttagataacttatttaaagta
ttgctcgactataagcgccaaggccactttagcggttattggaactcagtacctgaatct
gttcagtatatgaaagatgagcgtgttcatattgaaagcatgttttcacctgcggtatct
gcgctaaatggccaaggcataaatgtgcgttttgctgctcctaaagaaggttacagaggc
tggcatggtgtaatgtgtttgtcgtcacaaacgcatgatagtgtaaaagatgcttcttac
gattatatgaattggtggttatctggctggccaggtgcgtttattgctcgccaaggttat
tacataagcaatccgcagcgttctaaaccattactttcacagaatgaatgggactattgg
tatgacggcaaaatcgcaaacactgatttattagaaacaaatggtaatattgcggttaga
aaaggcgaacaaagaaatggtggaagttacactaaacgcttcagtaatgttgcagtatgg
aataccgtcatgccaacctacgactacagtttacaaaagtggtatgagttaataagtcga
taa
DBGET
integrated database retrieval system
