Pseudoalteromonas marina: CPA52_02610
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Entry
CPA52_02610 CDS
T06578
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pmaa
Pseudoalteromonas marina
Pathway
pmaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CPA52_02610 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaa03019
]
CPA52_02610 (recQ)
03400 DNA repair and recombination proteins [BR:
pmaa03400
]
CPA52_02610 (recQ)
Enzymes [BR:
pmaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPA52_02610 (recQ)
Messenger RNA biogenesis [BR:
pmaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CPA52_02610 (recQ)
DNA repair and recombination proteins [BR:
pmaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CPA52_02610 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Helicase_Sgs1
HEM4
Motif
Other DBs
NCBI-ProteinID:
ATG57204
LinkDB
All DBs
Position
complement(574392..576215)
Genome browser
AA seq
607 aa
AA seq
DB search
MNTSTLPSSTLVRKPETVLKQVFGYSEFRDGQKAVIDATLNAQDTLVLLPTGGGKSVCYQ
IPALVLEGVTIVISPLISLMQDQVAQLQALGVKAAYVNNSLAREEQQRVYQQLHQGLIKL
LYVAPEKVLQRDFLERLSHLKISLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMM
ALTATADKATRFDIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRYLKEQKNQS
GIIYCTSRKRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGM
GINKPNVRFVLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFEDIDDE
QRRRVEEQRFNAMASFAEAQTCRRQILLNYFSEYQREQCGNCDICLNPPKSFDGTLVAQQ
ALSCVYRAEQRFGLGYIVELLRGANTSRIRDNNHHQLSTYGIGKDRSSEFWLSILRQLIH
QGLLSQDITQGASLRLTEAARAILKSEYALQLAEPRLQAKHVYQDKLAQFNYDKKLFARL
RSLRKELADADDVPPYVVFNDKTLAEMAQLMPTNDSEFLKVSGVGFTKLNKYGGAFLTAI
RNYLATQ
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaatacatctacactaccttcaagcaccttagtgcgaaaacccgagactgtcctcaaa
caagtgtttggttacagcgagtttcgagatggccaaaaagccgttattgatgccacttta
aatgctcaggacacacttgttttgctacccactggtggcggaaaatctgtgtgttatcaa
attccggcgttagttcttgaaggggtgaccattgttatctcgccacttatttcgcttatg
caagatcaagtcgcgcagcttcaagctttgggtgtaaaagcggcatatgttaataacagc
ctagctcgcgaagaacagcaacgtgtttatcagcaacttcaccaagggcttattaaacta
ttgtatgtagcccccgaaaaagtattacaacgtgactttttagagcgattatcgcattta
aaaataagcttatttgcgatcgatgaagcgcattgtgtgtcgcattggggtcatgatttt
agaccgcattattttcgcttaaacgaacttaagcaacgctttgcccatgtgcctatgatg
gcccttacagcgacggccgataaagccacacgctttgatattgttgaacagttaaaactt
cagcagccttacattcatactggcagctttgatagacctaacattcgttacaccatagaa
gagaaatttaaacctatggtgcaactattacgctacttaaaagaacaaaaaaaccaaagt
ggcattatttattgtactagccgaaagcgtgttgacgacatagcagaaaaacttgccgac
gcaggccttaatgcagccgcttaccatgcaggtatgagcaacgaacaacgccagtttgtg
caaacagggtttgcccgtgacgatattcaaatagtggtggcaaccgtggcttttggtatg
gggattaataaacccaatgtacgttttgttttgcactacgacattcccaaaagtatagaa
gcatactatcaagaaacaggaagagcaggacgcgatggcttagccgccgaagcaattatg
tactttgatcctgccgatataggccgtgtaaggcgcttttttgaagatattgacgacgag
caacgtcgccgtgtagaagagcagcgctttaatgccatggcaagctttgctgaggcacaa
acgtgccgccgtcagatactacttaactactttagtgaataccaacgcgagcaatgtggt
aactgtgatatttgcttaaacccaccaaaaagctttgacggtacgcttgttgcccaacaa
gcgctttcgtgtgtatacagagctgaacagcgatttggtttaggatacattgtagagcta
ttacgtggcgccaacacgagtcgtattcgcgataacaaccaccatcagttgagcacttac
ggcataggtaaagacagaagcagtgagttttggctgagtattttacgccaattaatccac
caaggattactaagccaagatataacacaaggcgcctctttgcgcttaaccgaagccgcc
cgcgctatattaaaaagcgaatacgcgctgcaattagctgaacctcgcttacaagcaaaa
cacgtatatcaagataagctagcgcaatttaattatgataaaaaactatttgctcgcttg
cgttcattacgtaaagaacttgcagatgccgacgatgtgccaccgtatgtggtatttaat
gataaaacgttagccgaaatggcgcagctaatgcccacgaacgacagtgagtttttaaaa
gtgtctggcgttggttttaccaagttaaacaaatacggcggagcttttttaacagcaatt
cgcaactacttagccacacaataa
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