Pseudoalteromonas marina: CPA52_03380
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Entry
CPA52_03380 CDS
T06578
Name
(GenBank) recombination-associated protein RdgC
KO
K03554
recombination associated protein RdgC
Organism
pmaa
Pseudoalteromonas marina
Brite
KEGG Orthology (KO) [BR:
pmaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaa03400
]
CPA52_03380
DNA repair and recombination proteins [BR:
pmaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CPA52_03380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
Asd-4
LysM_OapA
Motif
Other DBs
NCBI-ProteinID:
ATG57340
LinkDB
All DBs
Position
complement(727035..727952)
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AA seq
305 aa
AA seq
DB search
MWFSNLICYRFKQDVSYTQEDFDKALEQDLFRPCTGQELSTFGWTKAFGKHSEALSHFSQ
KSILVCAKREEKVLPASVINELVAEKVDQIEAEENRPVKKKEKDELKENILHSLLPQAFK
KSSLQFAFIDQENGWVVVNSASFNKAEELLALLRKSLGTLPVVPAFANYDLDVFLTDWLT
NFSTPEGFAIGSDAELEEADDSGAQVKLKGHDLSCDEVKSHLESGKRVTKLALDWQERVK
FMLQNDGSIKRLSYSDTLKEENADIPKEDMAVKLDADFILASEEIKQLLEELTQGLGDAD
DLANP
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtggtttagtaaccttatttgttaccgctttaaacaagatgtttcgtacacacaagaa
gactttgataaagcattagaacaagatctatttcgtccttgcacaggtcaagagctctct
acgtttggctggacgaaagcatttggaaagcatagcgaagcactttctcacttctctcaa
aaaagtattttagtgtgtgctaaacgcgaagaaaaagtattacccgcatcagtcatcaac
gaattagttgccgaaaaagttgaccaaatcgaagctgaagaaaaccgccccgttaaaaag
aaagaaaaagacgaacttaaagaaaatattcttcactccctacttccgcaagcatttaaa
aagtcgagcttacaatttgcatttattgaccaagaaaacggttgggttgtggttaatagt
gcaagctttaataaagctgaagagctgttagcactgttacgtaaatcgttaggtacgctt
ccagttgtgcctgcatttgcaaattatgaccttgatgtatttttaactgattggctaact
aacttcagcacacctgaaggctttgcaattggttctgacgctgagcttgaagaagctgat
gatagtggcgcgcaagttaaattaaaaggccatgacttgtcatgcgatgaagttaaatca
catcttgaaagtggtaaacgcgttactaagcttgcacttgattggcaagaacgtgttaaa
ttcatgcttcaaaatgatgggtcaattaaacgtctaagttattcagatacactgaaagaa
gaaaacgctgacatacctaaagaagatatggcagtaaaacttgatgctgacttcatttta
gcatcagaagaaattaaacagttgctagaagagctaacccaaggtttaggtgatgcagat
gatttagccaatccataa
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