Pseudoalteromonas marina: CPA52_05880
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Entry
CPA52_05880 CDS
T06578
Name
(GenBank) Fis family transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
pmaa
Pseudoalteromonas marina
Brite
KEGG Orthology (KO) [BR:
pmaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaa03000
]
CPA52_05880
Transcription factors [BR:
pmaa03000
]
Prokaryotic type
Helix-turn-helix
Other families
CPA52_05880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
PAS_9
PAS_4
AAA_5
AAA
Mg_chelatase
AAA_2
AAA_3
PAS_3
MCM
AAA_16
AAA_7
AAA_19
PAS_8
AAA_22
PAS_7
HTH_8
TIP49
bpMoxR
nSTAND3
PAS_13
ABC_tran
Spectrin_SESTD1
Motif
Other DBs
NCBI-ProteinID:
ATG57792
LinkDB
All DBs
Position
1274091..1275503
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AA seq
470 aa
AA seq
DB search
MIKQFLNDPKLLLNAVGEGIYGFDLSGNAVFVNPAAERMTGWKAEELLGKKIHQYHHHTR
ADGTPYPADECQIYCTMFDGKRREVNNEVFWRKDGSSFAVEYTSTPVYRKNQLIGAVAIF
RDISQQQQTQNDLQNALKKIKQLSEQLKDENSYLIAELNQDWQDSGLVGQSHVFQTMLEQ
IKLVSETDTTVLILGENGTGKELVARNLYRLSKRSKHAFIKVNCAAFTPSLLESELFGHE
KGAFTGANERRKGRFELADKGTLFLDEIAELPLESQSKLLRVLQEQEFERVGGSQTLSVN
IRVIAATNRDLWQMVQKGSFRIDLYYRLNVFPIKVPALRERKEDIPYLCSNLIQQLNKRL
GKQLKGLSKKAVTKLQAYDWPGNIRELQNVLEREAILSKQSVLQLNQPLNGDTTQNVDES
LTLDEAQRLHISRVLTLCNGQISGSKGAALKLGLPESTLRSKMRKLGINK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgataaagcaatttttaaacgatccaaagttattacttaatgccgtgggtgagggaatt
tacggattcgacttgtctggaaacgctgtatttgtaaacccagcagcagagcgcatgaca
gggtggaaggcagaggagctactaggaaaaaaaatacatcaatatcatcaccatactcgt
gccgatggcacgccttaccctgcagatgagtgtcaaatttactgtaccatgtttgatggt
aaacgccgtgaagttaacaatgaagtgttttggcgcaaagacggtagctcgtttgctgtt
gaatatacatccactccagtgtatcgaaaaaatcaacttattggtgccgttgctatattt
cgtgatatatcgcagcagcaacaaacccaaaatgatttacaaaacgcacttaaaaaaata
aagcagctgagtgagcagttaaaagacgagaatagctatttaatagcagagttaaatcag
gactggcaagactctgggcttgtagggcaaagccatgtgttccaaaccatgttagagcaa
atcaaattagtgagcgaaaccgacactaccgtgcttattctgggagaaaatggcacaggt
aaagagctagtagcacgcaatttatataggttaagcaaacgcagcaagcatgcctttatt
aaagtaaattgtgcagcttttacaccgagcttattggagtctgagctgtttgggcatgag
aaaggcgcttttactggggctaacgaacgtcgtaaaggccgatttgaactggccgataaa
ggcacactttttttagatgaaatagccgaattacctctagaatcacaaagtaagctacta
agagtgctacaagagcaagaatttgagcgggttggtggtagccaaaccttaagtgtaaac
attcgagttatagcggctacaaaccgcgatttgtggcaaatggtgcaaaagggcagtttt
agaatagatttatattatcgacttaatgtatttcctattaaagtaccggccctgagagag
cgtaaagaggatattccttacttatgcagcaacctcatacagcaattaaataaacgcttg
gggaagcagttaaaagggttaagtaaaaaagcagttactaagcttcaagcctacgattgg
cctggcaacataagagagctgcaaaatgtactggagcgagaagccattttgtccaaacaa
tctgttttacagctcaatcaaccactcaatggtgacactacgcaaaatgttgacgagtct
cttaccctcgatgaggcgcaaaggctgcatataagccgtgttttaacactgtgtaacggg
caaatttcgggaagtaaaggtgctgcactgaagttagggttacctgaaagtacacttcgc
tcaaaaatgagaaagctaggaattaataaataa
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