Pseudoalteromonas marina: CPA52_07725
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Entry
CPA52_07725 CDS
T06578
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pmaa
Pseudoalteromonas marina
Pathway
pmaa03030
DNA replication
pmaa03430
Mismatch repair
pmaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPA52_07725
03430 Mismatch repair
CPA52_07725
03440 Homologous recombination
CPA52_07725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmaa03032
]
CPA52_07725
03400 DNA repair and recombination proteins [BR:
pmaa03400
]
CPA52_07725
Enzymes [BR:
pmaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPA52_07725
DNA replication proteins [BR:
pmaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPA52_07725
DNA repair and recombination proteins [BR:
pmaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPA52_07725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
RusA
RTC
Motif
Other DBs
NCBI-ProteinID:
ATG58134
LinkDB
All DBs
Position
1677953..1678657
Genome browser
AA seq
234 aa
AA seq
DB search
MFFKEVKNWNTRYAQLADDAQNNLLKEFYLSTFSDASASVKDIPFVALDFETTGLNSKTD
DIVSVGLVPFTLARIYFKQSKHWVVQPRRNLSESSIVIHGITHNDVDNAPDFDNIIAPLL
DALRSKVIVVHYAAIERGFFNSALLLRLKEHIEFMVVDTMELERRALKAKQGLIGQLFNT
KLGSLRLNDCRKRYSLPAYEGHHALTDALATAELLQAQLRHHYTEETPLCTIWS
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcaaagaagttaaaaactggaatacacgttatgctcagcttgccgatgatgcg
caaaacaacttactaaaagagttttatttatctacatttagtgatgctagtgcttctgta
aaagacattccttttgttgcattagattttgaaacaacagggcttaatagtaaaacagat
gatattgtgagtgtggggttagtgccattcacattagcgcgaatatactttaaacagagt
aaacattgggtggttcagccaagacgaaacctaagtgaatcatctattgtgatccacggt
attactcataacgatgttgataacgcgcctgactttgacaacatcatagcccctttactt
gatgctttgcgttctaaggtgattgttgttcactatgcggcaatcgaacgtggctttttt
aatagtgccttattattgcgattaaaagagcatattgagtttatggttgtagataccatg
gaacttgagcgaagagcgctcaaagcaaaacaaggcttaatagggcagctatttaacact
aaactgggatcgctaaggctaaatgactgtcgtaaacgttattctctacctgcttatgaa
gggcatcatgcgttaacagatgcgcttgcaaccgctgagcttttacaagctcaattgcgc
catcattacacagaagaaacaccgttatgcactatatggagctga
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