Pseudoalteromonas marina: CPA52_09840
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Entry
CPA52_09840 CDS
T06578
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pmaa
Pseudoalteromonas marina
Pathway
pmaa03030
DNA replication
pmaa03430
Mismatch repair
pmaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPA52_09840
03430 Mismatch repair
CPA52_09840
03440 Homologous recombination
CPA52_09840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmaa03032
]
CPA52_09840
03400 DNA repair and recombination proteins [BR:
pmaa03400
]
CPA52_09840
Enzymes [BR:
pmaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPA52_09840
DNA replication proteins [BR:
pmaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPA52_09840
DNA repair and recombination proteins [BR:
pmaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPA52_09840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_14
AAA_5
AAA_18
AAA_assoc_2
AAA_16
AAA_30
AAA_7
AAA_2
PIF1
AAA_19
nSTAND3
RCF1-5-like_lid
Rad17
TsaE
Mg_chelatase
AAA_24
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ATG58530
LinkDB
All DBs
Position
complement(2143670..2146165)
Genome browser
AA seq
831 aa
AA seq
DB search
MSYQVLARKWRPQTFHELVGQSHVKQALVNALTQNRLHHAYLFTGTRGVGKTTIARIFAK
SLNCDEGISASPCGQCSSCTDIEAGRYIDLLEIDAASRTKVEDTREILDNVQYAPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLNALSQ
SEIKTQLQHVLTQEQLRFDNDALSVIAKAADGSMRDALSLTDQAIAQTNGDINNQAVQAM
LGLMDTHYSQSLLAALLSQDGAALMSEIANVASKNPNYIALLDDLISLTHLTQLTQLVPQ
AAGLDETNADYIKHVAEHTSAQQVQVYYQLLLNGKKDLQWAPEPRLGFEMILLRLLAFQP
AGNETQQGEISTPQLPARNTESRANALRDILSKNKPESTNNAANHSDTNTVQQPAEKSII
SAEQHEQVTPTVTDTPVDSAHVEHLQVENEEAQTETSQNTPAKQISDEQAQRNSENEAYM
QHNDVEQTLAAQFDDVMSSALDQGFNPQTQSTTQQAETPSAPVSLDASSLHDKESQAQSA
IARILRDRNISGSGRLSGNNIAQPPMSEKPETANNEQNNRLVGSPIAEQSEATNKDIHTH
SENAEHPLAASVQSTNPPPWDDYNTGEHEKKSELPDSGSQAKRPSVVATKAQKVDFKAKH
QTITENLAPELLEQINPQSVPAPAPQEESIPVPDDFQSPISEIKFAHQQDEWAYLIKRMG
LGGRMRQFALHSIFTKQGSNLHIDVDESQKHLDTPMLRQKLDAALSSIYDHNVSLSIKFA
QGVIDSPYLIQQKIDAGRHQQAIDVITSDENIVQFQQLFSAEIDENSIQAL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttctagcgagaaaatggcgtccacaaacctttcatgaattggttggg
cagtctcatgttaaacaagcgcttgttaatgcgcttacacaaaatagactgcatcacgcg
tatttattcactggaacccgaggagttggtaaaacaactattgcgcgtatttttgcaaaa
agcttaaattgcgacgaaggtatttcggcatctccttgtgggcaatgtagcagctgtaca
gatattgaagcagggcgctacattgacttgctagaaattgatgctgcctctcgtactaaa
gtagaagatacgcgtgaaatacttgataacgttcaatacgcacctacgcgcgggcgttac
aaagtatacctaatagatgaagttcacatgctttcaaagcatagttttaacgcgctttta
aaaacgcttgaagaaccgccagagcatgtgaaatttttactcgcaaccaccgatccccaa
aagttacccgttactattttatcgcgatgtttacagtttaatctaaacgctttatcgcaa
agtgaaattaaaacacagcttcaacacgttttgactcaagaacaactacgctttgataac
gatgcacttagcgttattgcaaaagctgcagatggcagtatgcgcgacgcgcttagctta
accgatcaagccatagcacaaacgaatggtgatattaataatcaagcggttcaagctatg
cttggtttaatggatacacactacagccaaagtttattagcagcattactaagtcaagat
ggcgctgcgctcatgagcgaaatagcaaatgtagcgagcaaaaatccaaattatatagcg
ttacttgatgatttaatttcattaacgcacttaacccagcttacccaattagtgcctcaa
gctgctgggcttgatgagaccaatgctgattacataaaacacgttgcagagcacaccagt
gcgcagcaagtgcaggtttattaccagttacttttaaacggtaaaaaagatttacaatgg
gcccctgaaccacgtttagggttcgaaatgattttgctgaggttacttgcatttcagcct
gcaggaaacgaaactcagcagggcgagataagtacgcctcaattgccggcacgtaacact
gaaagccgagccaatgcactgcgcgatattttaagtaaaaataagcctgaaagtactaat
aacgctgctaatcatagcgacacaaacactgtacagcaaccagctgaaaaatcgattata
agtgcagaacagcatgagcaagtaacccccactgttactgacacgcctgttgattctgct
cacgtagagcatttacaggttgaaaacgaagaggctcaaactgaaacgagccaaaataca
cctgcgaagcaaataagtgatgagcaagcacagcgtaacagcgaaaatgaagcgtacatg
cagcacaatgatgtagagcaaacattagctgcacaattcgatgatgtaatgagtagcgcg
ctagatcaaggctttaatcctcaaactcaaagtacaacgcaacaggctgaaactccaagc
gctccagtctctttggatgcatcttcactgcatgataaagagtctcaggcacaatcggcc
attgcacgcatcttacgtgacagaaatatatcaggttcaggcaggttatcgggtaataat
atagctcagccgccaatgtctgaaaaacctgaaactgctaataatgagcaaaataacagg
ctggttggttcgccaattgcagagcaaagtgaagccactaataaagatatacacactcat
tctgaaaacgcagaacacccgctcgcggcttctgtgcaatctactaacccaccgccgtgg
gatgactacaatacaggcgagcatgaaaaaaagtctgagctccctgatagcgggagccaa
gcaaaacgccccagtgtagtcgctacaaaagcacaaaaagttgattttaaagctaagcat
caaacaatcactgaaaatttagcgcctgagttactagaacaaattaatcctcaaagtgtg
cctgctccagctccacaagaggaaagtattccggttccagatgattttcaaagcccaata
agtgaaataaagtttgctcatcagcaagacgagtgggcttatttgataaaacgtatgggg
ctgggtggacgaatgcgccaatttgcgctgcattcaatttttacgaagcagggaagtaac
ttacatatagatgttgatgaatcgcaaaaacacctagatacgccaatgcttcgccaaaaa
cttgatgccgcattatcgagtatttacgatcacaatgtgtcgctgagtataaaatttgct
caaggggttatcgattcgccttatttaattcaacaaaaaatagatgcagggcgccatcag
caagcaatagatgtgatcacaagtgacgaaaacatagtacaatttcaacagttatttagc
gccgaaattgacgaaaacagtattcaggcattgtaa
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