Pseudoalteromonas marina: CPA52_10000
Help
Entry
CPA52_10000 CDS
T06578
Name
(GenBank) HTH-type transcriptional regulator CysB
KO
K13634
LysR family transcriptional regulator, cys regulon transcriptional activator
Organism
pmaa
Pseudoalteromonas marina
Brite
KEGG Orthology (KO) [BR:
pmaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaa03000
]
CPA52_10000
Transcription factors [BR:
pmaa03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CPA52_10000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
ATG58559
LinkDB
All DBs
Position
complement(2179000..2179977)
Genome browser
AA seq
325 aa
AA seq
DB search
MKLQQLRYIVEVQNHKLNVSATAESLFTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT
SAGEDIINISREILSKVEGIKAVANEHTLPDQGKLNIATTHTQARYALPSVIQGFMKKYP
AVSLHMHQGTPQQISDAAARGDADFAIATEALHLYSDLVMLPCYHWNRSIVVAKDHPLAK
KANSLTVADIAEYPLITYVFGFTGRSELDKAFSAHGLEPHIVFTATDADVIKTYVRLGLG
VGVVASMAIDEITDTDLVCIDASHLFEASTTKIGFRKGSFLRTYMYDFIERFAPHLTKER
VERASLLRNQDDVDKLFEDIELPVK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaaattacaacaactcagatacatagtagaagtacaaaatcataaattaaatgtttca
gcaacggctgagagtttatttacctcacagcctggtatttctaaacaagtacgtatgtta
gaagatgagttaggtgttcaaatttttgggcgaagtggcaagcatttaacgcatgtaact
agtgccggtgaagatattataaatatctcgcgagagatactttcaaaggtagaaggtata
aaagcggtagctaacgagcacacattaccagaccaaggtaagctcaatatagcaacaacg
cacactcaagcacgttatgctttacctagtgtgattcaggggtttatgaaaaaataccct
gcagtatcattgcatatgcaccaaggtacaccgcaacaaatatctgatgccgcagcaagg
ggcgatgccgattttgccattgcaacagaagcgcttcatttatactctgatttagttatg
ttgccttgttatcattggaatcgcagtattgttgttgcaaaggatcatccacttgctaaa
aaagccaatagtttaacggtagcagatattgccgaatacccgctaattacttatgtattt
ggttttacgggtcgctctgaattagacaaagcatttagcgcccatgggttagagccgcat
attgtatttacggcgactgatgccgatgtaattaaaacctatgtgcgtttagggcttggc
gtaggggtagtggcttcaatggcgattgatgaaatcactgatactgatttagtctgcatt
gatgcaagtcacttatttgaagctagcactacaaaaattggctttagaaaaggcagcttt
ttacgtacttatatgtatgactttatagaacgatttgcgccgcatttaactaaagagcga
gtggagcgcgcgagtttattacgtaatcaagatgatgtagataagttatttgaagatata
gagttacctgtaaagtag
DBGET
integrated database retrieval system
