Pseudoalteromonas marina: CPA52_11030
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Entry
CPA52_11030 CDS
T06578
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pmaa
Pseudoalteromonas marina
Pathway
pmaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CPA52_11030 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaa03019
]
CPA52_11030 (pnp)
03016 Transfer RNA biogenesis [BR:
pmaa03016
]
CPA52_11030 (pnp)
Enzymes [BR:
pmaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CPA52_11030 (pnp)
Messenger RNA biogenesis [BR:
pmaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CPA52_11030 (pnp)
Transfer RNA biogenesis [BR:
pmaa03016
]
Prokaryotic type
tRNA degradation factors
CPA52_11030 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
S1_2
KH-I_KHDC4-BBP
aRib
DUF3016
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
ATG58720
LinkDB
All DBs
Position
complement(2375726..2377852)
Genome browser
AA seq
708 aa
AA seq
DB search
MQAIIKEFQLGQHTVTLETGAIARQADGAVLASIGDTSVLVTVVGKREAQPGQDFFPLTV
NYQERMYAAGRIPGGFLKREGRPNDGETLIARLIDRPIRPLFPNGFVNEVQVIATVVSVN
PEIQPDMVAMIGTSAALAISGIPFSGPIGAARVGYIGGEYVLNPTLKELEESQLDLVVAG
TDNAVLMVESEADVLAEDVMLGAVVYGHEQSQSIINAINEFKAEAGKPTWDWTAPEKNVS
LEEKVAELAADKVGEAYRITDKVARKEALGVAKDAVIEALSSELAEGETLDKQEVGKVFG
SLEKKIVRGRIAAGEKRIDGREPDMIRALDVMTGVLPRTHGSAIFTRGETQALVTATLGT
ERDSQLIDDLTGTHKNHFMLNYNFPPFCVGETGFVGSPKRREIGHGNLAKRGIQAVMPTL
TDFPYSIRVVSEITESNGSSSMASVCGTSLALMNAGVPIKASVAGIAMGLVKEDEKFVVL
SDILGDEDHLGDMDFKVAGTTNGITALQMDIKIEGITQEIMQIALKQAKAARLHILEVMD
EAISAPSEELSMFAPRIYTMKIPQKKIAEVIGKGGATIRQLTEETGTTIEIGDDGTIKIA
ATDGESAANAISRIEQLTAELEVGTIYEGKVVRIVDFGAFVNILPGKDGLVHISQISTER
VNNVADHLSEGQEVKVKVLEVDRQGRVRLSIKEAMESAAPAADASTDA
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagcaattataaaagaatttcaactaggtcaacacactgtaaccctagaaacaggt
gcaatcgcacgtcaagcagacggcgcagtactagcaagcattggcgatacgtcagtacta
gtaacggttgttggtaagcgtgaagcacagccaggtcaagacttcttcccactaacagtt
aactaccaagagcgtatgtacgctgcaggtcgtatcccaggtggtttccttaagcgtgaa
ggtcgtcctaacgatggcgaaacactaattgcacgtcttattgaccgtccaattcgtcca
cttttcccaaatggttttgtaaacgaagtacaagttattgcaactgttgtatctgtaaac
cctgaaatccaacctgatatggttgcgatgattggtacatcagcagcacttgctatctct
ggtatcccgttcagtggtccaattggtgcagctcgtgttggttacattggtggtgaatac
gttcttaacccaacgttaaaagaacttgaagagagccaacttgatttagttgttgctggt
actgataacgcagtacttatggttgaatcagaagcagacgtacttgctgaagacgtaatg
ctaggcgcggttgtatacggccatgagcaatcacagtctatcatcaatgctattaacgaa
tttaaagcagaagcaggcaagcctacttgggattggactgcacctgagaaaaacgtatct
cttgaagagaaagtagctgaacttgctgctgataaagtaggcgaagcttaccgtattact
gataaagtagcgcgtaaggaagcacttggcgtagctaaagatgcagttatcgaagcactt
tcaagcgagcttgctgaaggcgaaacgcttgataagcaagaagtgggtaaagtattcggt
tcacttgagaagaaaattgttcgtggccgtatcgctgcaggcgaaaaacgtatcgatggt
cgtgaaccagatatgatccgtgcactagacgtaatgactggcgtattaccgcgtactcac
ggttctgctatcttcacacgtggtgaaacgcaagcattagtaacagcaacgcttggtaca
gaacgtgattcacagttaatcgacgatttaacgggcacgcacaaaaaccactttatgctt
aactacaacttccctccattctgtgtaggtgaaactggttttgttggttctcctaagcgt
cgtgaaattggccacggtaacctagctaagcgtggtatccaagcagtaatgccaacattg
actgacttcccatattcaatccgtgttgtatctgaaatcactgaatcaaacggttcatct
tcaatggcatctgtgtgtggtacatcactagcgcttatgaacgcgggtgttccaattaaa
gcatctgttgcaggtattgctatgggtctagttaaagaagacgagaaattcgttgttctt
tctgacatcttaggtgacgaagatcacttaggtgacatggactttaaagtagcgggtact
actaacggtatcactgcattgcaaatggatatcaagattgaaggtatcacacaagaaatc
atgcaaattgcgcttaaacaagcaaaagcagcacgtttacacatattagaagtgatggac
gaagcgatttctgctccttctgaagagctttcaatgtttgctccgcgcatttacacaatg
aaaattccacagaagaaaattgctgaagttattggtaaaggtggcgctactattcgtcaa
cttactgaagaaacaggcacaacaattgaaatcggtgatgacggtacaatcaaaattgcc
gctactgacggtgaaagcgctgcaaatgcaatcagccgcattgagcaactaacagcagaa
cttgaagtaggtactatctacgaaggtaaagttgtacgtattgtagatttcggtgcgttt
gtaaatattcttccaggtaaagatggtttagtgcatatttctcaaattagcacagagcgc
gttaataacgttgctgatcaccttagcgaaggtcaagaagttaaagttaaagtactagaa
gtagaccgtcaaggtcgtgtacgtcttagtattaaagaagcaatggaatcagctgcacca
gcggcagatgcgtcaactgatgcttaa
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