Pseudoalteromonas marina: CPA52_11040
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Entry
CPA52_11040 CDS
T06578
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pmaa
Pseudoalteromonas marina
Brite
KEGG Orthology (KO) [BR:
pmaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmaa03016
]
CPA52_11040
Enzymes [BR:
pmaa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CPA52_11040
Transfer RNA biogenesis [BR:
pmaa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CPA52_11040
Prokaryotic type
CPA52_11040
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF5791
T6SS_Vgr
Motif
Other DBs
NCBI-ProteinID:
ATG58722
LinkDB
All DBs
Position
complement(2378562..2379506)
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AA seq
314 aa
AA seq
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MARRSKGRPIDGILLLDKPKGISSNKALQQAKGIYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAKLGERTTTSDSDGEIVQTRDVNVTVDQLKQEISAFLGESDQ
YPSMYSALKYEGKPLYKYAREGIEVPRKCRKINVFSLTLDEFDEANNEVQMTAHVSKGTY
IRTIVDDLGENLGCGAHVIMLHRSAVGHYPADKMVSIEQLESLLAKAKDEETVPSTYLDE
LLLPMDTALVDLPVVEITKEQGVSFSHGQAVVIGKELPDGAIKVLADGVFIGTGEKNPDG
HLKSKRGLSNQQAE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgcagtaaaggccgtccaatagacgggattttgttgttagataaacccaaa
ggtatttcgtcaaacaaggcattacagcaagcaaaaggtatctattttgcccaaaaggcg
gggcacacaggtgcactcgacccgcttgctaccggtatgctgccaatctgttttggtgaa
gcgactaagtttactcagtttttacttgataccgataaaacctatgttgtgcgagctaag
ttaggtgaaagaacaacaacatcagactctgatggtgaaatagttcagacgcgagatgta
aacgtaactgttgatcaactaaagcaagaaatttcagcgtttttaggtgaatctgatcag
tatccatcgatgtattctgcgcttaagtatgaagggaaacctttgtataaatatgcgcgt
gaagggattgaagttcctcgaaaatgcagaaaaataaatgtatttagcctaacgcttgat
gagtttgatgaagcgaataatgaagtacaaatgacagctcacgtttctaaagggacttac
attcgtactattgttgatgacttaggtgaaaacttaggctgtggtgctcatgtaattatg
cttcatcgctcggctgttggccattaccccgcagataaaatggtatcgatagagcagtta
gaatcgttactagctaaagccaaagacgaagaaaccgttccgtcaacctaccttgacgaa
ctgcttttgccaatggacaccgctctagttgatttaccggttgtggaaatcactaaagag
cagggtgtttcatttagccatgggcaagctgtagttattggtaaagaattacctgatggt
gcaataaaggtattagccgatggtgtgtttataggcacaggcgagaaaaaccctgatggc
catttaaaatcaaaacgcggtctatcaaaccagcaggcagagtaa
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