Pseudoalteromonas marina: CPA52_11075
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Entry
CPA52_11075 CDS
T06578
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pmaa
Pseudoalteromonas marina
Brite
KEGG Orthology (KO) [BR:
pmaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaa03400
]
CPA52_11075
Enzymes [BR:
pmaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
CPA52_11075
DNA repair and recombination proteins [BR:
pmaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
CPA52_11075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DUF2380
Motif
Other DBs
NCBI-ProteinID:
ATG58728
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Position
2386129..2387685
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AA seq
518 aa
AA seq
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MATYKTLRLILGDQLNPSHSWFKGKEDDVLYLIAELKQETNYVKHHVQKLCAFFNAMENF
ATALKSAGFNVLHLTLDDTHEDKHLPALLNRVAKEYNCSCIEYLYPDEFRLKSQLADFEK
SSEINVSAYDSEHFLLPFNEIKDRFKKDKHVTMEHFYRAMRKRYDLLMEDDKPAGGKWNY
DSNNRNKFSKQDLKSIPEPKLFKNDVSHILARLKKHNIAYFGEIKEGKLEWSTSRKQAKE
SLEYFCEHLLANFGKFQDAMTDQSKDNTSLYHSRLSFALNTKLLHPLYVIKRVISEFEQR
PDEISLSQVEGFTRQILGWREYVRAVYWVNMPDYATKNQLKANNKLPQYFWDGNTKMNCL
NHSLKQSLDTAYAHHIQRLMIIGNFCLLSGINPDEVDNWYLGVYIDAIEWVEMPNTRGMS
QFADDGIIATKPYAASGNYVNKMSDYCKNCQYDVKQKVGDKACPLNSLYWRFMQTHREKL
EKNPRIGMVYRNWDKQSDELREDTLNQATHYINNIESL
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttacaaaaccttaagactcattttaggcgatcaactcaatccttctcattct
tggtttaaaggtaaagaagacgatgttctctaccttatcgcagaattaaaacaagaaacc
aattacgttaaacaccatgtgcaaaagctttgtgctttttttaatgcgatggaaaacttt
gcaactgcgttaaaatctgcaggtttcaatgtattgcacttaaccctagacgacacacac
gaagataaacacctacccgcactactaaatcgtgttgctaaggaatataactgctcctgc
atagaatacttatacccagacgaatttaggttaaaatcgcaattagctgattttgaaaaa
tcatccgaaataaatgtatcagcatatgactcagagcattttttactaccctttaacgaa
attaaagatcgattcaaaaaagataagcacgtgaccatggagcacttttatcgtgctatg
cgtaaacgatatgatttattaatggaggacgataagccagctggcggtaaatggaactac
gacagtaataaccgcaataaattttctaagcaagacttaaaatctatcccagagcctaaa
ttatttaaaaacgatgtaagtcatatcctcgctcgtttaaaaaaacacaacatcgcttac
tttggagaaattaaagaaggaaaactcgaatggtctacgtcacgtaagcaagccaaagaa
tctcttgaatacttttgtgagcatttacttgccaattttggtaagtttcaggatgcaatg
acagatcaaagtaaagacaataccagtctttaccatagcaggctctcttttgccctaaac
acaaaacttcttcaccccttgtatgtaatcaaacgtgtaatatctgaattcgagcaacgg
cctgacgagatatctctttcacaagttgaagggtttaccaggcaaatactcggttggcga
gaatacgttcgtgctgtttattgggtaaacatgcccgactacgcgactaaaaatcaacta
aaagccaataataagctccctcaatatttttgggatggtaatacaaaaatgaactgtttg
aaccactcattaaagcaaagcttagatactgcctatgctcatcatatacagcgcttgatg
atcattggtaacttttgtttactcagcggaataaaccctgacgaagttgataactggtac
ttaggtgtctatatagatgccattgagtgggtagaaatgcccaacacacgtggaatgagc
caatttgcagacgatggaattattgctaccaaaccctatgctgcaagtggtaattacgtt
aataaaatgagcgactactgcaaaaattgtcaatacgacgtgaaacaaaaagtgggggat
aaagcttgcccactgaacagtttatattggcgttttatgcaaacacaccgcgaaaaacta
gagaaaaatccacgcataggcatggtttatagaaattgggataagcaaagcgatgaatta
cgcgaagacacacttaatcaagctacacactacataaataacattgagtctttatga
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