Pseudoalteromonas marina: CPA52_11600
Help
Entry
CPA52_11600 CDS
T06578
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
pmaa
Pseudoalteromonas marina
Pathway
pmaa02020
Two-component system
pmaa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pmaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CPA52_11600
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CPA52_11600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaa03021
]
CPA52_11600
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pmaa02035
]
CPA52_11600
Transcription machinery [BR:
pmaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CPA52_11600
Bacterial motility proteins [BR:
pmaa02035
]
Flagellar system
Flagellar assembly proteins
Stator
CPA52_11600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
GerE
UPF0122
Motif
Other DBs
NCBI-ProteinID:
ATG59722
UniProt:
A0ABT9F9E5
LinkDB
All DBs
Position
complement(2497404..2498114)
Genome browser
AA seq
236 aa
AA seq
DB search
MGYQSAQNLNVIVEKHASLVKKVACHLIARLPASVQLDDLIQSGMIGLIEASKSFDATKG
ASFETFAGIRIRGAMLDEMRRGDWAPRSVHRKSRLVAETIAFLEKSLNREPTDIEVAEKL
EISLNEYHHILNDVNASKVLGIEDLGVDEDAISPVGQDLALDKPFNNVKNERFNESLLGA
IKSLPERDAMVLSLYYNDEMNLKEIGHILDVSESRVSQIHGQAMIKLKAKINDWIN
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgggatatcaatcagcacaaaatttaaatgtgattgttgaaaaacatgcatcacttgtc
aaaaaagtggcatgtcatcttatagcgcgtttaccagccagcgtgcagctggacgattta
atacaatcaggaatgataggtctgattgaagcatctaaaagttttgatgcaaccaaaggg
gctagctttgaaacttttgcggggattcgtattcgtggggcaatgcttgacgagatgcga
cgtggcgattgggcaccccgttcagtgcatcgtaaaagccgtttggtggccgaaacaatt
gcttttttagaaaaaagcttaaaccgtgagccgacagatatagaagttgctgaaaaactt
gaaatttcgttaaatgagtaccatcatatcttaaacgatgtaaatgcaagtaaagtactc
ggtattgaagaccttggtgttgatgaagatgccatcagtccagtgggccaagatttagcg
ctagacaaaccgtttaataatgttaaaaatgagcggtttaacgagtctttattaggtgca
ataaaatctttaccagaacgtgatgcaatggtgctgtctttgtactataacgatgaaatg
aatttaaaagaaatagggcatatactcgatgtaagtgaatcgcgtgtaagtcaaatacat
ggtcaggcgatgattaagcttaaagctaaaatcaatgactggataaattag
DBGET
integrated database retrieval system
