Pseudoalteromonas marina: CPA52_12395
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Entry
CPA52_12395 CDS
T06578
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pmaa
Pseudoalteromonas marina
Brite
KEGG Orthology (KO) [BR:
pmaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaa03400
]
CPA52_12395
DNA repair and recombination proteins [BR:
pmaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CPA52_12395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Zn_ribbon_LapB
DnaB_C
AAA_22
Lon_C
SLFN-g3_helicase
AAA
nSTAND3
AAA_16
AAA_14
AAA_18
ABC_tran
NPHP3_N
cobW
Rad51
RecA
ATPase_2
MMR_HSR1
AAA_30
GvpD_P-loop
AAA_19
AAA_11
AAA_24
TsaE
NTPase_1
NACHT
CobU
VapE-like_dom
Zeta_toxin
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ATG58976
LinkDB
All DBs
Position
complement(2666428..2667813)
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AA seq
461 aa
AA seq
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MAKAAKVEFVCTECGMNYQRWQGQCRCGAWNTLAEFKPSAGQSKKATARSSVGGYAGGIG
GGSKKINDIATVEAEKQLTEIGELDRVLSGGVTTGSVNIISGDPGAGKTTLLSDLVARMS
KRMPSLYCTAEESLSQFKNRVNRLKLDYNADELYLLSETSVETIIEELDKNKIKFAVIDS
IQAVVTDTANGSPGSPSQVKSAAQALTQYCKQNDVTMFIIAHVNKNNEIAGPQTLVHIVD
ALLHIDTNDGQIRTLRANKNRFGDIDTVGIFKMCERGMLSVDNPSEIFLSGSTTESPGSS
ITCIRKGNRNLLLEIQCLTTETEAEFPQRVCVGLNMNRIKMLTGILRKHTKTKIFHDTFF
NIVGGLKIDESETCIDLALVTALLSSLNEFVVPRTTCIMGELSLNGDVRPIDSGVPRVKE
AAQHGFTEIFIPFRNYHKSMEGLGAKITPVKTVHELLSLIN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagcggcaaaagtagagtttgtttgtacagagtgtggcatgaactatcaacgt
tggcaggggcaatgtcgttgcggtgcgtggaatacattagctgaatttaaaccttcagca
gggcaaagtaaaaaagcaactgcacgctcaagtgttggcgggtatgccggaggtattggt
ggtggttctaaaaaaattaatgacatagcgaccgttgaagccgaaaaacaactcacagaa
ataggcgagcttgaccgtgttttaagtggtggtgttactacgggttctgtaaatattatt
tcgggcgatcctggtgctggtaaaacaacgcttttatctgacttggtggcaagaatgtca
aagcgtatgccgtctctttactgtaccgctgaggagtctttatcgcagtttaaaaatcgt
gttaaccgcttaaagttagactataacgcagatgagctttatttgctttcagaaaccagc
gttgagaccattattgaagagcttgataaaaataaaataaaatttgcagtcatcgactcc
attcaagccgttgttacagacactgcaaatggcagtccaggctctccttcgcaagttaaa
agtgcagctcaagcattaactcaatattgtaagcagaatgacgtgaccatgtttattatt
gctcacgtgaataaaaataacgaaattgcaggcccgcaaaccttggtgcatattgttgat
gcgctattacacatagacaccaatgatggacaaatacgtaccctacgtgccaataaaaac
cgctttggtgacattgatactgtgggtatttttaaaatgtgtgaacgtggaatgttaagc
gtagacaacccgagtgagatatttttatcgggctcgacgactgaatccccggggtcgtct
attacctgtatccgtaaaggtaatcggaatctattgcttgaaatacaatgtttaacaaca
gaaaccgaggctgaatttccacagcgtgtttgtgtaggtttaaatatgaaccgcataaaa
atgctcacaggtattttacgtaaacatacaaaaacaaaaatatttcacgatacctttttt
aatattgtgggtggtttaaaaattgatgaatcagaaacctgtatagatttagcccttgtt
actgcgttactaagtagcttgaacgaatttgttgtgcctcgaaccacttgtattatgggg
gagttgagtttaaacggtgatgtgcgcccaatagacagcggcgtaccacgagttaaagaa
gctgcacagcatggttttacagaaatatttatcccgtttcgtaactaccataaatcaatg
gaaggcctaggcgctaaaataactccagtaaaaacggtacatgagttattgagcctgatt
aattaa
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