KEGG   Pseudoalteromonas marina: CPA52_12765
Entry
CPA52_12765       CDS       T06578                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pmaa  Pseudoalteromonas marina
Pathway
pmaa03030  DNA replication
pmaa03430  Mismatch repair
pmaa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CPA52_12765
   03430 Mismatch repair
    CPA52_12765
   03440 Homologous recombination
    CPA52_12765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmaa03032]
    CPA52_12765
   03400 DNA repair and recombination proteins [BR:pmaa03400]
    CPA52_12765
Enzymes [BR:pmaa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CPA52_12765
DNA replication proteins [BR:pmaa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CPA52_12765
DNA repair and recombination proteins [BR:pmaa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CPA52_12765
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: ATG59047
LinkDB
Position
complement(2742485..2743108)
AA seq 207 aa
MVKMLLTRYIKRRQLLAKNAFSQRYLVIDLELTGLDSKQHEIVSVAWVVIDNQCIKMSES
QHFINKDVKSLEQSPVFHGISTDSVAQGQSLQSILMSLSAHFSDCILVFHNAMLDWGFLK
LALKNAGVTQRPKLIIDTLQIEKKRLLQHASDIKLDDLTLNECRNRYDLPSYHCHHALTD
AQATAELLLAQCHQIGAGKELTLRALV
NT seq 624 nt   +upstreamnt  +downstreamnt
atggtaaaaatgttacttacgcggtatataaagcgccgtcaattactagcaaaaaatgca
ttctcgcagcgctatttggtgattgatttagagctcacagggcttgactcaaaacagcac
gaaatagtgtcggttgcatgggttgtaattgataaccaatgtataaaaatgagcgagtcg
caacattttattaataaagacgtaaaaagccttgaacaaagcccggtttttcatggtatt
agtactgactcggtggcacaagggcaaagcctacagagtattttaatgtctttaagcgct
cactttagtgactgcattttagtatttcataatgccatgcttgactggggctttttaaag
ttagcactaaaaaatgcaggggtcacccagcggcctaagctgatcatcgataccctacaa
atagaaaaaaagcgcttactgcaacacgcaagcgatataaaattagatgatttaacctta
aatgaatgccgtaatcgctacgatttaccaagctatcattgccatcatgcgcttaccgat
gcacaagccactgctgagctgttattggcccaatgccatcaaataggcgccggtaaagag
ttaacgttaagagcactagtttaa

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