Pseudoalteromonas marina: CPA52_14545
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Entry
CPA52_14545 CDS
T06578
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pmaa
Pseudoalteromonas marina
Pathway
pmaa03030
DNA replication
pmaa03410
Base excision repair
pmaa03420
Nucleotide excision repair
pmaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPA52_14545
03410 Base excision repair
CPA52_14545
03420 Nucleotide excision repair
CPA52_14545
03440 Homologous recombination
CPA52_14545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmaa03032
]
CPA52_14545
03400 DNA repair and recombination proteins [BR:
pmaa03400
]
CPA52_14545
Enzymes [BR:
pmaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPA52_14545
DNA replication proteins [BR:
pmaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CPA52_14545
DNA repair and recombination proteins [BR:
pmaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CPA52_14545
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPA52_14545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
DUF2845
Motif
Other DBs
NCBI-ProteinID:
ATG59375
LinkDB
All DBs
Position
complement(3133392..3136127)
Genome browser
AA seq
911 aa
AA seq
DB search
MAQIPENPLILVDGSSYLFRAYHSPPHLTNSKGEATGAIYGVINMLKSLIRQYDPSHMVV
VFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPIHSIIKAMGFPLISIEGVEADDVIGT
FARIASEQKRHVLVSTGDKDMAQLVNEHVTLINTMTDSISDPDTVVEKFGVGPDLIIDYL
ALMGDKVDNIPGVEGCGPKTAVKWLQKYGSLQGVMDNAGEIKGKIGEKLANALDHLPLSY
ELATIKCDVEVESDLDTFKLQEPNKDELIALYGECEFRRWLAELLDNPSDAQTHLAVPSQ
ETELPKVEEAHYETILTEAQFDTLIEQLNGADLFAFDTETTSLDYMQAQLVGMSFSVKAG
EAAYLPVAHDYPDAPDQLSLEFVMQKLGPILADANKAKVGQNLKYDKSVLANAGYELNGI
KFDTMLESYVFNSVGTRHDMDSLALKYLGHKNISFEDIAGKGKKQLTFNQIELDKAAPYA
AEDADITLRLHEVLWPKIEADEKLKSVFEEIEMPLVSVISDIERTGVAIDSNMLGAHSQR
LGERLIELEKEAFEIAGEPFNLSSPKQLQVLLFEKLELPIIKKTPKGAPSTAEEVLQELA
HDYPLPKVIIEHRGLSKLKSTYTDKLPLMVNEKTQRVHTSYHQAVTATGRLSSTDPNLQN
IPIRSEEGRRIREAFIAADGYKIVAADYSQIELRIMAHLSQDKGLLNAFANGLDVHSATA
AEVFGVDLDDVTTDMRRKAKAVNFGLIYGMSAFGLARQLDVPRHEAQHYIDKYFERFPGV
LEYMETTREKAAENGYVETIFGRRLHLPEINARNGARRKGAERAAINAPMQGTAADIIKK
AMLSVNKWVYEQAPNTVKLLMQVHDELVFEIKTDCAEAYTKQICELMSQAASLDVPLIVE
ADEGENWEQAH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatccccgaaaatccacttattttagttgatggttcgtcgtatttatttcgt
gcttatcattctcctccacatctaactaattctaagggtgaggcaacgggcgctatttat
ggcgttattaatatgctgaaaagcttgatcagacagtatgatccctcgcatatggtggtt
gtatttgacgccaaaggtaaaacattccgtaacgacatgtacagcgaatacaaagctaat
cgcccacctatgcctgacgacttacgcacccaaatagcacctatccacagtattattaaa
gcaatggggtttccgcttattagtattgaaggggttgaagcagacgatgtcattggaacc
tttgcgcgaattgcctctgagcaaaaacgccatgtactggtttcgaccggcgataaagat
atggcccagcttgtgaatgagcatgtgacactcattaatacgatgaccgacagtatttca
gatcctgacactgttgttgaaaagtttggtgtgggcccagatcttataattgattaccta
gcactgatgggcgataaggttgataacattcctggcgtagaaggctgtggccctaaaaca
gctgtaaaatggttacaaaaatatggatctctgcaaggtgtaatggataacgcaggcgaa
attaaaggtaaaattggtgaaaaattagcaaatgcattagatcatttacctttaagctat
gagttggcgaccattaagtgtgacgttgaggttgagtcagatcttgatacgtttaaattg
caggagccaaataaagacgagctaattgctttatatggtgaatgcgaatttcgtcgttgg
ttagctgagctactagataacccaagtgatgcacaaactcacttagcagttccatcgcaa
gaaacagaattaccaaaagttgaagaggctcattacgagactattttaacagaggcgcag
tttgatacgttaatagagcaacttaatggcgctgatctttttgcttttgatacagaaaca
actagcctcgattatatgcaagcgcaattagtaggcatgagttttagcgttaaagcagga
gaagctgcatatttacctgttgcgcacgattaccccgatgcaccagatcaactaagcctt
gaatttgtgatgcaaaagcttgggccaattttagctgacgctaataaagcgaaagtaggg
cagaatcttaaatacgacaaaagcgtattagctaatgccggctatgaactcaatggtatt
aaatttgacactatgcttgagtcatatgtatttaacagcgtaggtacgcgccacgatatg
gattcgttggcattaaagtatttaggtcataaaaatattagttttgaagatattgcaggc
aagggtaaaaagcagctgacgtttaatcaaattgaactcgacaaagcagcgccttatgca
gcagaagacgcggacataactcttcgcttacacgaagtactgtggcctaaaattgaggca
gatgaaaagcttaaatcagtatttgaagagattgaaatgccattggtaagcgtcatttca
gatattgagcgcacaggggttgcgattgatagcaacatgcttggcgcgcatagccaacgt
ttaggtgagcgcttaattgaacttgaaaaagaggcgtttgaaattgcaggtgaacctttt
aatttaagttcaccaaaacagttacaagtattattgtttgaaaagctagagctgccaata
attaaaaaaacgcctaaaggtgcaccttcaaccgcagaagaagtacttcaagaactcgct
catgattacccgttacctaaggttattattgaacaccgtggtttatcaaaacttaaatca
acatataccgataaactaccgcttatggttaatgaaaaaacacagcgtgtacatacgtca
tatcatcaagctgtaacagcgacagggcgtttaagttctactgatcctaatctgcaaaat
attcctattcgctcagaagagggtcgtcgtattcgagaggccttcattgctgccgatggt
tataaaatagtggcagccgattacagccaaattgaattacgcataatggcgcatctttca
caagataaaggtttgcttaatgcttttgcaaacggtttagatgttcatagtgcgaccgcg
gccgaggtgtttggtgttgatttagatgacgtaacaacagacatgcgccgtaaagcaaaa
gccgtaaactttggtcttatttatggtatgtcggcttttggcttagcacgccagttagat
gtaccacgccatgaagctcaacattatattgataaatattttgaacgttttccaggcgta
ttagagtacatggaaacaacacgcgaaaaagcagcagaaaatggatatgttgaaacaata
tttggacgcagattgcatttacctgaaataaatgcccgtaacggagcccgtcgtaaaggc
gcggagcgtgctgctataaatgcgcctatgcaaggcactgctgctgatataattaaaaag
gctatgttaagtgttaataagtgggtgtacgaacaagctccaaataccgtgaagctgctt
atgcaagtgcacgatgaattagtatttgagattaaaactgattgtgcagaggcttacaca
aaacaaatttgcgagttaatgtcacaagctgcttcactcgatgtaccgctaatagtagag
gctgacgaaggtgaaaactgggaacaagcccactaa
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