Pseudoalteromonas marina: CPA52_15195
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Entry
CPA52_15195 CDS
T06578
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pmaa
Pseudoalteromonas marina
Brite
KEGG Orthology (KO) [BR:
pmaa00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
CPA52_15195
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
RuvX
Motif
Other DBs
NCBI-ProteinID:
ATG59491
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Position
3275320..3277644
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AA seq
774 aa
AA seq
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MSDISARLASELNAQQQQVVAATKLLDEGATVPFIARYRKEVTGGLDDTQLRLLEQRLSY
LRELEERRSFILSTIESQKKLTAELKADITSAQSKTELEDLYLPYKAKRRTKGQIAIEAG
IEPLADALFTDASLNPEQHAEQYINADKGFNDTKAVLDGAKFILMERFSEDAKLLAKLRS
HISQNGAIQSTVIKGQEQAGTKYRDYFDHQELLTKVPSHRALAMLRARNEGILQLNVNPE
PSSENPAQLCANMIAQHYRLNITDQTASTWLLNVVQWAWKIKLGLHLENEFFAAMREKAE
AGAIDVFAKNLKDLLMAAPAGPRTTLGLDPGLRTGCKIAVVDSTGKLLTTQTIFPHAPQN
HWDKSLRTLEQLCRQHKVELIAIGNGTASRESDKLVAELMKANTELKLNKIMVSEAGASV
YSASEFAANEFPDLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVSQSQLGQT
LTAVVEDCVNSVGVDLNMASVPLLTRVSGLNKTLAQNIVNYRDSNGSFAKRSELKKVERL
GQKAFEQAAGFLRINNGSDPLDNSSVHPEAYPVVKQICEKNNAEVTTLIGNSEFLNKLVA
NDYTNEKFGLPTVTDIITELDKPGRDPRPEFKTAEFKAGVEKISDLKPGMILEGVVSNVA
NFGAFVDVGVHQDGLVHISAITNKFISDPREVVKAGDIVKVKVVEVDASRKRISFTMRLN
DEIDTSNKPAPAAQKQQPRTNNAQPKAAKPKRDSGNAVMGNAFADAFANAKVKK
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatatctctgcacgtttagccagtgagctaaatgcacaacaacaacaagttgtt
gctgcaacaaaattacttgatgaaggcgcaactgttccctttattgcccgctacagaaaa
gaagtcaccggcggtttagatgacactcaattgcgcttgctagagcagcgtttatcttac
cttcgagaacttgaagagcgtcgtagctttattttgtcgactatcgaatctcaaaagaag
cttaccgcagagctcaaagccgatatcactagcgcgcaaagtaaaacagaactcgaagat
ttatatcttccatataaagcaaaacgccgcaccaaaggccaaatagccatagaagcaggc
atagagcccctagccgatgcgttatttaccgacgcgagtttaaatcctgagcaacacgct
gagcagtacattaatgctgataaaggctttaatgacacaaaagccgtgcttgatggtgct
aaatttattttaatggagcgtttttccgaagatgcaaaattactcgctaaattaagaagt
cacataagccaaaacggtgcaatacaaagcacggtaattaaaggtcaagaacaagcgggc
actaaatatcgcgattacttcgatcatcaggagctacttactaaagtaccttcgcatcgt
gcattagctatgctgcgagctcgcaacgaaggcatacttcaattaaatgtaaaccctgaa
ccaagttctgaaaaccctgctcaactttgtgcaaatatgattgcacagcactaccgctta
aatattaccgaccaaacagcgagtacttggcttttaaacgtggtgcaatgggcttggaaa
attaagctaggtttacacttagaaaacgagttttttgcagccatgcgcgaaaaagcagaa
gcaggcgctattgatgtatttgctaaaaacttaaaagacttactaatggcggcacctgca
ggcccacgcacaacacttggacttgatcccggtttacgtaccggttgcaaaattgctgtt
gtagacagcacaggtaaactgctaactacgcaaactattttccctcatgccccgcaaaac
cattgggataaatcgctgcgtacactagagcaactttgccgccaacacaaagtagaactt
attgccattggtaacggtacagcgtcgcgcgagtcagacaaattggttgctgagctaatg
aaagcaaataccgagttaaaacttaataaaattatggtgagcgaagctggcgcgtcggtt
tactcagcatctgaatttgcagctaacgaatttcctgacttagatgtgtcattacgtggc
gcggtatcgattgcacgtcgcttgcaggatcctcttgctgaacttgttaaaatagagcct
aaatcaattggtgtagggcaatatcaacacgatgtgtcgcaaagccaactcggacaaaca
cttacagccgttgttgaagactgtgtaaactcggtaggtgttgatttaaatatggcgtcg
gttcctttacttacacgcgtatcaggattaaacaaaaccttagcgcaaaacattgtaaat
taccgcgattccaatggatcatttgcaaaacgtagtgagctaaaaaaagtagaacgctta
gggcaaaaagcatttgaacaagctgctggtttcttacgaattaacaatggcagcgaccca
cttgataactcatcagttcaccctgaagcctaccctgttgttaagcaaatttgcgaaaaa
aacaacgcagaagtaaccacattaattggtaatagcgaatttttaaacaagctcgttgct
aacgactacaccaacgaaaaatttggtttacctacggttaccgatattattactgagctt
gataagccgggtcgcgatccacgtccagagtttaaaacagctgagtttaaagcaggtgta
gagaaaataagtgacctaaaaccaggtatgattttagaaggtgttgtatcgaatgttgct
aactttggtgcgtttgtagatgtaggtgttcaccaagatgggttagtgcatatttcggcg
attacgaataagtttatatctgatcctcgcgaagtagttaaagcgggcgacattgtaaaa
gttaaagtagtggaggttgatgcttcgcgtaaacgtattagctttaccatgcgtttaaac
gacgaaatagacaccagcaacaagccagcccctgctgcacaaaaacaacagccgcgcact
aacaatgcgcaaccaaaagctgctaaacctaaacgtgatagcggtaatgcggttatgggt
aacgcgtttgctgatgcatttgcgaatgccaaagtaaaaaaatag
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