Pseudomonas marginalis: U0037_00130
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Entry
U0037_00130 CDS
T10241
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
pmab Pseudomonas marginalis
Pathway
pmab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U0037_00130 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmab02000
]
U0037_00130 (choX)
Transporters [BR:
pmab02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
U0037_00130 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
WQD72400
LinkDB
All DBs
Position
complement(28940..29854)
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AA seq
304 aa
AA seq
DB search
MQKLTVVLGMLVLSSANVYADASCETVKMADPGWSDIAATNAITGFLLTGMGYKAKVDTL
AVPITFGGLKDGQVDVFLGNWMPAQQGFYDKFVANGDVVQLAKNLDGTEFTLAVPDYVWD
AGVHDFADLNKFADKFDKKIYGIGSGAPANISLQEIIKKNDFDLGQWKLVESSEQAMLAE
VSRAVKKQKFVTFLGWTPHPMNVQLKMHYLKGGEKYFGDTGSVYTLTRKGYAQACPNIGK
LLTNLSFTQEMENAIMAQVANNKVSNAEAAKAWIKANPAVLDKWLEGVKTLDGKDALSAV
KAKL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagttaactgtggtgttgggtatgttggtactgagtagcgccaacgtgtacgcg
gacgccagctgcgaaacggtaaagatggccgatccaggctggagcgatatcgcggccacc
aatgccatcaccggttttttgctgaccggcatgggctacaaggccaaggtcgacaccctc
gcggtcccgatcaccttcggggggctcaaggacggccaggtggatgtgttcctgggtaac
tggatgccggcgcagcaaggcttctacgacaagttcgtggctaatggcgatgtggtgcaa
ctggcgaaaaacctcgacggcaccgagttcaccctcgccgtgccggactatgtgtgggac
gccggggtgcatgacttcgccgacttaaacaaatttgccgacaaattcgacaagaagatc
tacggcatcggctccggtgcacctgcaaatatctcgttgcaggaaatcattaagaaaaac
gactttgatctcggccagtggaagctggtggaatccagcgaacaggcgatgctcgccgaa
gtatcacgggctgttaagaagcagaaattcgtgaccttcctcggctggactccgcacccg
atgaacgtgcaattgaaaatgcactacctcaagggtggcgagaaatattttggtgacacc
ggcagtgtgtataccttgacccgcaagggctatgcacaggcctgcccgaatatagggaaa
ttgctgaccaacctgagctttacccaggagatggagaacgcaatcatggcgcaggtggcc
aataacaaggtcagcaacgccgaggcggcgaaggcgtggatcaaagccaacccggcggta
ttggacaagtggctggagggtgtaaaaacactggacggcaaagacgcactttctgcagtt
aaagccaaactctaa
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