Pseudomonas marginalis: U0037_01000
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Entry
U0037_01000 CDS
T10241
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pmab Pseudomonas marginalis
Pathway
pmab02020
Two-component system
pmab02024
Quorum sensing
pmab02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U0037_01000
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U0037_01000
02025 Biofilm formation - Pseudomonas aeruginosa
U0037_01000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmab03000
]
U0037_01000
Transcription factors [BR:
pmab03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
U0037_01000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR_2
HTH_24
MarR
HTH_3
Crp
GntR
HTH_11
HTH_36
HTH_29
HTH_IclR
HTH_28
Sigma70_r4_2
Sigma70_r4
Xre-like-HTH
HTH_41
HHH_XRCC3_RpoA
HTH_23
TrmB
HTH_DeoR
NirdL-like_HTH
HVO_A0261_N
DUF1670
DUF3565
HTH_AsnC-type
HTH_ParB
wHTH-PRTase_assc
Motif
Other DBs
NCBI-ProteinID:
WQD72565
LinkDB
All DBs
Position
217565..218251
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AA seq
228 aa
AA seq
DB search
MDADKWHARLGCGHWFRHLPSDLQRSLLAAARPRSLTAGQLLFKRGDPPCGVYAVLEGGV
RISAVNAQGKEAVLSLVETPYWFGEICLFDGLPRTHDALAMGPCTLLQVPQAAMLGILER
HPPYWRDVALLMSHKLRLSLINIEQMSLMPALARLAHRLLMIAEGYGEIEQARRVLHLPQ
EDLAAMLGLSRQTINSLLKTLEQQGVIELSYGAIEILDFNGLRLSAGL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagacaaatggcacgcccggttgggctgtggccactggttccgtcatctgcct
tcagacttgcagcgtagcttgctggcagcggcccggccacgctcgctgacagcaggacag
ttgctgttcaagcgcggtgatcccccgtgcggtgtgtatgccgtgctggaaggtggggtg
cgtatcagtgcagtgaatgcccagggcaaggaagcggtattgagcctggttgagacgcct
tactggttcggcgaaatctgcctgttcgatggcctgccgcgtacccatgatgcccttgcc
atggggccatgcacattactgcaggtgccgcaggcggcaatgctcggcatcctggagcgg
catccgccgtattggcgcgatgtagccctgctgatgagccacaaactgcgcctgtcattg
atcaatatcgagcagatgagcctgatgcccgcgttggcgcggctggcccatcggctgctg
atgatcgctgaaggctacggggagatagaacaggcccgccgcgtgttgcacttgcctcag
gaggatcttgcggcaatgctgggcctgtcgcgccagaccattaacagtctgctcaagacg
ctggagcaacagggcgtcattgagctcagttacggcgcgattgagatactcgatttcaat
ggcctgcggctgtctgcgggcctatga
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integrated database retrieval system
