Pseudomonas marginalis: U0037_05680
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Entry
U0037_05680 CDS
T10241
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
pmab Pseudomonas marginalis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_16
AAA_19
TIP49
AAA_22
OKR_DC_1_N
APS_kinase
HTH_24
AAA_18
AAA_2
DUF3410
MCM
Motif
Other DBs
NCBI-ProteinID:
WQD73449
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Position
1265844..1267241
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AA seq
465 aa
AA seq
DB search
MTHNILVVDDEPKLCDLLASALGQNNVQVFIAGNGLHALKVLEQEDIDLVISDWRMPGMD
GPALLAEIKVRYPHVPVIVMTAYSTVKNAVQSMRNGAYDYIAKPFDIDELDITVAKALQF
RDIMRDNARLRAELDEHAQFDSLVGDSPAFRKVLQAVDSVRDSSATILLTGESGTGKEMV
ARAIHKHGSRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFQQADKGTLF
LDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLEAVANKEFREDL
YYRLNVFPIPLPALRERVEDIAPLARHFAQTLSATAGKRITGFSPEALQAMAAYHWPGNI
RELQNCVERATIVAAKPVIEDIDLPGYLFASRPSEGGVTAILSDGPGIPQDLDAALAEVE
KAYILAALQESNGVQAAAAAKIGISERSFWYRLKKLGIQVDKIVR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacgcataacattctggtagtcgacgacgaacccaagctctgcgacctgctggcgtcg
gccctgggccagaacaacgtgcaggtgtttatcgccggcaacggcctgcacgcgctcaaa
gtgctggagcaggaagacatcgacctggtgatcagcgactggcgcatgccgggcatggac
gggcccgcgctgctggccgagatcaaggtgcgttacccgcatgtgccggtgatcgtgatg
accgcctacagcacggtgaaaaacgccgtgcagtcgatgcgcaacggcgcctacgactac
atcgccaagccgttcgacatcgacgagctggacatcactgtggccaaggccctgcagttt
cgcgacatcatgcgcgacaacgcgcgcctgcgtgccgagctggacgagcacgcacagttc
gacagcctggtgggcgacagcccggcgtttcgcaaagtgctgcaagcggtggactcggtg
cgcgacagcagcgccacgatcctgctgaccggcgaaagcggcaccggcaaggaaatggtc
gcccgcgcgatccacaagcacggcagccgtgccgataaaccgttcgtggcggtcaactgc
gcggccatcccggaagggctgctggaaagcgaaatgttcggccatcgtaaaggcgcgttc
accggcgccgtggccgaccgggtagggcgcttccagcaggccgacaagggcacgctgttt
ctcgacgaagtgggcgacatgcccctggcgctgcaggccaagatcctgcgtgcgttgcag
gagcgggtgatcgaaccggtgggcgatccccgcgagcgcaaggtggacgtgcgggtcatc
gccgccaccaataagaatttgctcgaggcggtggccaacaaagagtttcgcgaagatctg
tattaccgcctcaacgtgttcccgatcccgctgccggccttgcgcgagcgcgtggaagac
atcgcgccactggcccgccacttcgcccagaccctgagtgccaccgccggcaaacgtatc
accggtttcagcccggaggccctgcaggccatggccgcgtatcactggccgggcaatatc
cgtgagctgcagaattgcgtggagcgcgcgaccatcgtggccgcaaagccggtgattgag
gacatcgacttgccgggttacctgtttgcatccaggccgagtgagggcggcgtgacggcg
atcctcagcgacggtccgggcattccccaggatttggacgcggcgctggcggaggtggag
aaggcctatatcctggcggcgttgcaggagagcaacggcgtgcaggctgcggcggcggcg
aagatcgggatatccgagcgaagcttttggtatcgcctgaagaagctggggattcaagtg
gacaaaatagtccgctga
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