Pseudomonas marginalis: U0037_06750
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Entry
U0037_06750 CDS
T10241
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pmab Pseudomonas marginalis
Brite
Transcription machinery [BR:
pmab03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
U0037_06750 (rapA)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WQD73658
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Position
complement(1491960..1494806)
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AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DSITHFEGWKMTVQEVDDVDGLLVYHGLNGQHEQVTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
TNPFEDTQLALVALEWLVDDEKAQDALFAAGWDLLVVDEAHHLVWHEDKASAEYSLVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLHAFRAESENYRPVAEAVQELLDK
GRLSPKAHETIQGFLGNEGEALLTAVNDGDTEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHAYPLPNPDEYMELPLGEHAELYPEVSFQSQPDVEEEHRWWRFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFSHHLVLFDLPSHPDLLEQRIGRLDRIGQKHVIELHVPYLETSP
QERLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLENADDGEWQALIDEARAERERLE
QELHTGRDRLLELNSGGAGEGDALVEDILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLSGRVTF
ETLNDQLESVPRASANKFIQAQRDQLTPRINAGEEKITPRHAERVAEAKRRLAADTDEEL
ARLTALQAVNPTVRDSELVALRTQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggattagtgacagcgaagcagagctgggg
ttaggcaccgttctggcacaggacggccgcttgttgaccgtgctctatccggccactggc
gacacccgccagtatgcgctacggaatgcgcccctcacccgcgtgaggttctcgccgggt
gactccatcacccatttcgaaggctggaaaatgaccgtgcaggaagtcgacgatgtcgac
ggcctgctggtgtaccacggcctcaatgggcagcacgagcaggtcaccctgccggaaacc
caactgtccaacttcattcagttccgcctggccagcgaccgcctgttcgccgggcagatc
gacccgctggcctggttctcgctgcgttaccacacgctggaacacaccagccgccaattg
cagtcttcgttgtggggcctgggtggtgtgcgtgcgcaacctatcgctcaccaattgcac
atcgcccgtgaagtcgctgaccgtatcgcgccacgggtattgctggctgacgaagtcggc
ttgggcaagaccatcgaagccggcctggtgatccatcgccaattgctgtcgggccgcgcc
agccgcgtgttgatcctggtaccggaaaacctgcagcaccagtggctggtggaaatgcgc
cgccgcttcaacctgcaggtcgcgctgttcgatgaagagcgctttatcgaaagcgatgcg
accaacccgttcgaagacacccagttggccctggtggccctggaatggctggtcgacgac
gaaaaggcccaggacgcgctgttcgcggccggttgggacctgttggtggtcgacgaagcc
caccacttggtgtggcatgaagacaaagccagcgccgaatattcgctggtcgaacaactc
gccgaagtgattcccggcgtgctgctgctcaccgctacccccgagcaactcggccaggac
agccacttcgcgcgcctgcgcctgctcgacccgaaccgtttccacgacctgcacgccttc
cgcgccgagagcgagaactatcgcccggtggccgaagccgtgcaggagttgctcgacaag
ggccgcttgtcccccaaggcccacgagactatccagggtttcctcggcaatgaaggcgaa
gcactgctgaccgccgtcaacgatggtgacaccgaagccagcgcgcgcctggtgcgtgag
ctgctcgaccgccacggcaccggccgcgtgctgttccgtaacacccgcgccgccgtgcaa
ggcttcccggagcgcaagctgcacgcctacccgttgccgaacccggacgagtacatggag
ttgccgctgggcgaacacgccgagctgtacccggaagtcagcttccagtcgcagccggat
gttgaagaagaacaccgctggtggcgcttcgacccacgggtcgagtggctgatcgaccag
ctgaaaatgctcaagcgcaccaaggtcctggtgatctgcgcccacgctgaaaccgccatg
gacctggaagacgccctgcgcgtacgttccggcatcccggccacggtgttccacgagggc
atgaacatcctcgagcgtgaccgcgccgccgcctacttcgccgatgaagagttcggcgcc
caggtgctgatctgctcggaaatcggcagtgaaggccgtaacttccagttctcccaccac
ttggtgctgttcgacctgccgtcccaccccgacctgctggaacagcggatcggccgtctg
gaccggatcggccagaaacacgtgatcgaactgcacgtgccgtacctggaaaccagcccg
caagagcgcctgttccagtggtaccacgaagcgctgaacgcgttcctcaacacctgcccg
accggcaacgccttgcagcatcagttcggcccacgcctgctgccgctgctggaaaacgcc
gacgacggcgagtggcaagccctgatcgacgaggcccgtgccgagcgcgagcgtctggaa
caggagctgcacaccggccgcgaccgtctgctggagctcaactccggcggcgcaggcgaa
ggtgatgcgctggtggaagacatcctcgagcaagacgatcagttcgccctgccgatctac
atggaaaccctgttcgacgcattcggcatcgacagtgaagaccattcggaaaacgcgctg
atcctcaagcccagcgaaaaaatgctcgacgccagcttccctctgggcgacgacgaaggc
gtgaccatcacctacgaccgtaaccaggcactgtcgcgcgaagacatgcagttcatcacc
tgggaacacccgatggtgcagggcggcatggacctggtgctgtccggttcaatgggcaac
accgccgtggcgttgatcaagaacaaggcgctcaagccgggcaccgtgttgctggaactg
ctctacgtcagcgaagtggttgccccgcgctcgctgcaactgggccgctacctgccaccg
gccgccctgcgctgcctgctggatgccaatggcaacgacctgtccggccgtgtgaccttc
gaaaccctcaacgaccagttggaaagcgtgccacgtgccagcgccaacaagttcatccag
gcccagcgcgaccagctgacgccgcggatcaacgccggtgaagagaagatcaccccacgc
cacgccgagcgcgtagccgaggccaaacgccgcctggcggcagacaccgacgaagaactg
gcgcgcctgaccgcgttgcaagcggtcaacccgaccgtacgcgacagcgagctggttgcc
ctgcgcacccaacgcgagcaaggcctggccatgctggataaggcggcgctgcgcttggaa
gcgattcgggttctggtcgccggttaa
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