Pseudomonas marginalis: U0037_07750
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Entry
U0037_07750 CDS
T10241
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pmab Pseudomonas marginalis
Pathway
pmab00071
Fatty acid degradation
pmab00280
Valine, leucine and isoleucine degradation
pmab00310
Lysine degradation
pmab00362
Benzoate degradation
pmab00380
Tryptophan metabolism
pmab00410
beta-Alanine metabolism
pmab00640
Propanoate metabolism
pmab00650
Butanoate metabolism
pmab00907
Pinene, camphor and geraniol degradation
pmab00930
Caprolactam degradation
pmab01100
Metabolic pathways
pmab01110
Biosynthesis of secondary metabolites
pmab01120
Microbial metabolism in diverse environments
pmab01200
Carbon metabolism
pmab01212
Fatty acid metabolism
Module
pmab_M00087
beta-Oxidation
pmab_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
Enzymes [BR:
pmab01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
U0037_07750 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
U0037_07750 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
U0037_07750 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
U0037_07750 (fadB)
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NCBI-ProteinID:
WQD73849
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Position
1700943..1703090
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AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMSATAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIARDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
DDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVHEVLAPVIYEQREVSDEDIINWMMIALCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGPLYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacaccatcaaggctgatgcatcgatcaaaggcgtgatcgtctccagc
ggcaaggacgtgttcatcgtcggcgctgacatcaccgaattcgtcgacaacttcaagctg
cccgatgccgagctggtggctggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaacgtaccgaccgtcgccgcgatcaacggcatcgcgttgggcggcggcctggaa
atgtgcctggcggcagacttccgcgtcatgtcggccacggccaagatcggcctgcctgaa
gtcaagttgggcatctacccagggtttggcggcaccgtgcgcctgccgcgcctgatcggt
gccgacaacgccatcgagtggatcgccgccggcaaggaaaaccgtgccgaagacgcgctg
aaagtcggtgccgtcgatgctgtggttgccccggacaaactcgccgaagccgcactgaac
ctgatcaaaggcgccatcagcggcgaatttgactacaaggccaagcgtcagccgaagctg
gaaaaactcaagctcaacgccatcgaacaaatgatgtcgttcgaaaccgccaagggtttc
gtggctggccaggccgggccgaactacccggcgccggttgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgcgacaaagccctggaagtggaagcggcaggtttcgtcaaa
ctggcgaaaacctcggcggcccagagcttgatcggcctgttcctgaacgatcaggagctg
aagaaaaaggccaaggcctacgacgagatcgcccgcgacgtgaaacaggctgccgtactc
ggcgccggtatcatgggcggcggtatcgcctatcagtcggcgtccaagggcacgccgatc
ctgatgaaagacatcaacgagcacggtatcgagcaaggcctggcagaagccgccaagctg
ctggtgggtcgtgtggataaaggtcgcatgaccgcagcgaagatggctgaagtgcttaac
ggcattcgtcctacgctgtcctacggtgatttcgggcatgtcgacctggtggtcgaagcc
gtagtcgagaacccgaaggtcaagcaggccgtgctggccgaagtcgaagcccaggtcaaa
gacgacactatcctggcctccaacacctcgaccatttccatctcgctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggtatgcacttcttcaacccggtgcacatgatgccg
ctggtcgaagtgatccgtggcgagaagtccagcgagctggccgtggccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaatgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggcttcgccaagctggtcagcgccggtgtggac
ttcgtgcgcatcgacaaggtcatggaaaaattcggctggccgatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccatggccgcgacgtgatggctgaaggcttc
ccggaccgcatgaaagacgaccgccgttcggcgatcgacgcgctgtacgaggccaagcgc
ctgggccagaagaacggcaagggtttctacgcctatgaggccgacaagaagggcaagcag
aagaaagtggccgacccgtcggtgcacgaagtgctggctccggtcatctacgaacagcgt
gaggtgtccgacgaagacatcatcaactggatgatgatcgccctgtgcctggaaaccgtg
cgttgcctggaagacggcatcgtcgagaccgccgccgaagccgatatgggcctggtgtac
ggtattggtttccctccattccgtggtggtgcgctgcgttacatcgattcgatcggtgtg
gctgagttcgttgccctggctgacaaatacgctgatttgggcccgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaatggccagagcttcttcggttaa
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