KEGG   Pseudomonas marginalis: U0037_09105
Entry
U0037_09105       CDS       T10241                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pmab  Pseudomonas marginalis
Pathway
pmab00010  Glycolysis / Gluconeogenesis
pmab00020  Citrate cycle (TCA cycle)
pmab00260  Glycine, serine and threonine metabolism
pmab00280  Valine, leucine and isoleucine degradation
pmab00310  Lysine degradation
pmab00380  Tryptophan metabolism
pmab00620  Pyruvate metabolism
pmab00630  Glyoxylate and dicarboxylate metabolism
pmab00640  Propanoate metabolism
pmab00670  One carbon pool by folate
pmab00785  Lipoic acid metabolism
pmab01100  Metabolic pathways
pmab01110  Biosynthesis of secondary metabolites
pmab01120  Microbial metabolism in diverse environments
pmab01200  Carbon metabolism
pmab01210  2-Oxocarboxylic acid metabolism
pmab01240  Biosynthesis of cofactors
Module
pmab_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pmab_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pmab_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
pmab_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pmab_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pmab00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    U0037_09105 (lpdA)
   00020 Citrate cycle (TCA cycle)
    U0037_09105 (lpdA)
   00620 Pyruvate metabolism
    U0037_09105 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    U0037_09105 (lpdA)
   00640 Propanoate metabolism
    U0037_09105 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    U0037_09105 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    U0037_09105 (lpdA)
   00310 Lysine degradation
    U0037_09105 (lpdA)
   00380 Tryptophan metabolism
    U0037_09105 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    U0037_09105 (lpdA)
   00670 One carbon pool by folate
    U0037_09105 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmab04147]
    U0037_09105 (lpdA)
Enzymes [BR:pmab01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     U0037_09105 (lpdA)
Exosome [BR:pmab04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   U0037_09105 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored HI0933_like GIDA NAD_binding_8 FAD_binding_3 AlaDh_PNT_C DAO Thi4 3HCDH_N 2-Hacid_dh_C Spike_JR1 Amino_oxidase
Other DBs
NCBI-ProteinID: WQD74111
UniProt: A0ACD4XYL5
LinkDB
Position
1988707..1990143
AA seq 478 aa
MSQKFDVVVIGAGPGGYVAAIKAAQLGLSTACIEKYTDKEGKLALGGTCLNVGCIPSKAL
LDSSWKFHEAQDGFAIHGINHAGVTMDVPAMVGRKANIVKGLTSGVATLFKANGVTSLQG
HGKLLAGKKVEITKPDGSTEIIEAENVILAPGSRPIDIPPAPVDQNVIVDSTGALEFQAV
PKRLGVIGAGVIGLELGSVWSRLGSEVTVLEALDTFLLAADTAVSKEALKTLTKQGLDIK
LGARVTGSKVNGEEVVVNYTDKDGEKTITFDKLIVAVGRRPVTTDLLASDSGVNIDERGF
IHVDDHCATTVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKTQMNYDLIPSVIYTH
PEIAWVGKNEQQLKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI
GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHIANKKKR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgtcgcagaaatttgacgttgtagtgattggtgcaggtcctggcggctatgttgccgcc
atcaaggccgcacaactgggcctctcgactgcttgcatcgaaaaatacaccgacaaggaa
ggcaaactggcactgggcggtacttgcctgaacgttggttgcattccctccaaggcgctg
ctggacagctcctggaaattccacgaagcccaagacggtttcgcgatccacggtatcaac
catgctggcgtgaccatggacgtaccagcaatggtcggccgtaaagccaacatcgtcaaa
ggcctgacctccggcgttgccaccttgttcaaggccaacggcgtcacttccctgcaaggc
cacggcaagctgctggccggcaagaaagttgaaatcaccaagccagacggttcgaccgaa
atcatcgaagccgaaaacgtgatcctggcaccaggctcgcgtccaatcgacattccaccg
gctccggtggaccagaacgtgatcgtcgattcgaccggcgccctggaattccaagcggta
cctaagcgtctgggcgtgatcggcgctggcgtgatcggcctggaactgggttcggtctgg
tcccgcctgggttccgaagtcaccgtgctggaagccctggacacgttcctgctggctgcc
gacaccgccgtgtccaaagaagcgctgaagaccctgaccaaacaaggtctggacatcaag
ctgggcgctcgcgtgaccggttcgaaagtcaacggtgaagaagttgtcgtcaactacacc
gacaaggatggcgaaaagaccatcactttcgacaagctgatcgtcgccgtgggtcgccgt
ccagtgaccaccgacctgctggcttcggacagcggcgtgaacatcgacgagcgtggcttc
atccacgttgacgatcactgcgctaccaccgtgcctggcgtctacgccatcggcgacgtg
gttcgcggcatgatgctggcgcacaaggcgtccgaagaaggcatcatggttgtagagcgc
atcaagggccacaaaacccagatgaactacgacctgatcccgtcggttatctacacccac
ccggaaattgcatgggtcggcaagaacgaacagcagttgaaagctgaaggcgttgaagtt
aacgtcggcaccttcccgtttgccgcttctggccgtgccatggcagccaacgacaccggt
ggttttgtcaaagtcatcgctgatgccaagactgaccgcgtattgggcgtccacgtgatt
ggcccaagcgctgcagaactggttcagcaaggcgcaatcggtatggaattcggcaccagt
gccgaagacctgggcatgatggtcttctcccatccgaccctgtccgaagcgttgcacgaa
gcagcattggcagtgaatggcggcgccatccacatcgccaacaagaagaagcgttaa

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