Pseudomonas marginalis: U0037_11400
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Entry
U0037_11400 CDS
T10241
Name
(GenBank) rhamnogalacturonan lyase B N-terminal domain-containing protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pmab Pseudomonas marginalis
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
U0037_11400
Enzymes [BR:
pmab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
U0037_11400
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
PapC_N
CarbopepD_reg_2
Ig_DR_A0283-like
Motif
Other DBs
NCBI-ProteinID:
WQD74517
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Position
complement(2461999..2463582)
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AA seq
527 aa
AA seq
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MRRFLLMVFCTLAAQAHAASFGFTRTDARIDVDTGTDLLFSVDTRNGDLVSMRYRDSELQ
TTEPKASQLASGLGSAQVDARTVADVIVISARAGNVIHYYLAKKGRAAIYMATYAPTLLP
VGKLRFVARLNVSKLPKADRGTDSNVGTAVEGKDVFLLPDGRTSSKFYSAHAMIDDPLHA
VKGPGVAVYMLMGNRELSAGGPFFKDIATQKTPITHELYNYMFSNHTQTEAYRGGLHGVY
GLLFTDGGAPSDTVKDLSFVNDNLGLAGFLGSTGRGALAGQVSGVASALPAVIGLSNAGA
EYWARADDSGRFQLTGIRPGKYRVTLYQNELEVAQRSVDINAGATTQTRLQAQPSTGQVK
WQIGTPDGTPAGFLNAHLLASAHPSDSRMAPWKPVTYTLGTSRPNEFPAAQWRDINTPTR
ITFMLAAHQVRDARLRLFISLAQAGGRPQVSVNQRWQAPVPPASNQPDSRGITRGTYRGN
NVVFEVSIPASALQVGANTLEIGVASGNTGKGFLSPGFVFDSVQWVQ
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgattcctgctgatggtgttttgtacgcttgcggcccaggcacacgccgccagc
ttcggcttcacgcgcaccgacgcccgaatcgacgtcgacaccggtacagacctgctgttc
agcgtggacacgcgcaatggcgacctggtctccatgcggtaccgcgacagtgaattgcag
accaccgagcccaaagcctcgcagcttgcatccggcctgggcagcgcgcaagtagacgcg
cgcacggtagcggacgtgattgtcatcagtgctcgcgcgggcaatgtgatccactactac
ctggcgaaaaaaggacgcgcagccatttacatggcgacctacgcgccaaccctgctaccg
gtgggcaagctgcgctttgttgcgcgactcaacgtcagcaagctgcccaaggccgatcgc
ggcaccgactccaacgtcggcacggcggtcgaaggcaaggatgtgtttctgctgcccgac
gggcgcaccagctccaagttctattcggcacacgcgatgatcgacgaccccctgcacgcg
gtcaaaggcccgggcgtggcggtctacatgttgatgggcaaccgtgagctcagtgctgga
gggccgtttttcaaagatatcgccacccagaaaacgccgatcacccacgagctgtacaac
tacatgttctccaatcacacccagaccgaagcctatcgcggcggcttgcacggggtgtac
gggctgttgtttaccgacggtggcgcgccctccgacaccgtgaaagacctgagcttcgtc
aacgataacctcggccttgccggcttcctgggcagcacaggacgaggtgcgctggccggt
caggtttcgggcgtggccagtgcattgccggcggtaatcggcttgagcaatgccggcgcc
gaatattgggcccgtgccgacgacagcggccggttccagttgacggggatacgtccagga
aagtaccgggtaacgctctatcagaatgagttggaggtggcgcagcgcagcgttgatatc
aacgcgggtgccaccacgcagacgcgcctgcaggcgcaaccgtcgacaggccaagtgaaa
tggcaaatcggcacacctgatggcactccggcagggtttcttaacgcgcacctgctcgcc
tccgctcatcccagcgactcacgcatggcaccgtggaagccggtcacctacaccctcggc
accagccgccccaacgagtttcccgccgcacaatggcgtgacatcaacacccccacgcgc
atcaccttcatgctggccgcccaccaagtgcgcgacgctcgcctgcgcctgttcatttcc
ctggctcaagctggtgggcgcccgcaggtgagcgtcaatcagcgctggcaggcgcccgtg
ccaccggcgtcgaaccagccggacagccggggcatcacccgtgggacttatcggggtaat
aacgtggtgtttgaggtcagcatccccgccagcgcgttgcaggttggcgcgaacacactg
gagatcggtgttgcatcgggcaacaccggtaaaggctttctgagcccgggttttgtgttc
gatagcgtgcagtgggtacagtaa
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