Pseudomonas marginalis: U0037_11780
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Entry
U0037_11780 CDS
T10241
Name
(GenBank) GntR family transcriptional regulator
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
pmab Pseudomonas marginalis
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmab03000
]
U0037_11780
Transcription factors [BR:
pmab03000
]
Prokaryotic type
Helix-turn-helix
GntR family
U0037_11780
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Ortholog
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GFIT
Motif
Pfam:
FCD
GntR
MarR_2
HTH_24
HTH_IclR
HTH_Crp_2
TrmB
Fe_dep_repress
HTH_CodY
DUF6880
HTH_11
HVO_A0261_N
GMT-wHTH
HTH_36
HTH_5
HTH_27
HTH_41
MarR
Ribosomal_S25
FliX
EAD11
HTH_28
HTH_20
HTH_23
EAP30
PLU-1
TFIIE_alpha
HTH_29
Motif
Other DBs
NCBI-ProteinID:
WQD74592
LinkDB
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Position
complement(2556890..2557642)
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AA seq
250 aa
AA seq
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MKRAPLDDSFKVNHNPVTLREIVLEKLRSAIMNFQLLPGDRLVERDLCDRLGVSRTSVRE
ALRHLESEGLVEFADAKGPQVAIITLADAVDIYELRCVLEGLIVQLFTLRAKAKDIKALE
KALEENRKALKDGELQQVIDSVQGFYDVLLEGSGNHVAATQLRQLQARISYLRATSVSQE
NRRGTSNQEMERMVQAIKSGDPLAAHQACVDHVRAAAAVALDYLKRKQEETGKLPEITLP
IALKEPRIGH
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgcgcccctcgacgacagcttcaaggtcaatcacaacccggtcaccctgcgc
gaaatcgtgctggaaaaactgcgcagcgccatcatgaacttccaactgctgcccggtgac
cgcctggtggagcgcgacctgtgcgaccgcctcggggtcagccgcacctcggtacgcgaa
gccttgcgtcacctggagtccgaaggcctggtggaattcgccgacgccaagggcccgcag
gtagcgatcattaccctggccgacgccgtcgacatctatgaactgcggtgcgtgctcgaa
ggcttgatcgtgcaattgttcaccctgcgcgccaaggcgaaggacatcaaggccctggaa
aaagcccttgaagaaaaccgcaaggccctcaaggacggagaactgcaacaggtcatcgac
tcggtgcagggcttctacgacgtgctgctcgaaggttcgggcaaccatgtggcggccacc
cagctgcgccagttgcaggcccgcatcagctacctgcgcgccacctcggtgtcccaggaa
aaccgtcgcggcaccagcaaccaggaaatggaacgcatggtccaggcgatcaagagcggc
gaccctctggccgcccaccaggcctgcgtcgatcacgtgcgcgccgccgccgccgtggcc
ttggactacctcaagcgcaaacaggaagaaaccggcaagcttccggaaatcaccctgccc
atcgcgctgaaagaaccgcgcataggtcactga
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