KEGG   Pseudomonas marginalis: U0037_14895
Entry
U0037_14895       CDS       T10241                                 
Symbol
alkB
Name
(GenBank) DNA oxidative demethylase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
pmab  Pseudomonas marginalis
Brite
KEGG Orthology (KO) [BR:pmab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmab03400]
    U0037_14895 (alkB)
Enzymes [BR:pmab01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     U0037_14895 (alkB)
DNA repair and recombination proteins [BR:pmab03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    U0037_14895 (alkB)
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2 2OG-FeII_Oxy_3
Other DBs
NCBI-ProteinID: WQD75175
UniProt: A0ACD4Y143
LinkDB
Position
complement(3248022..3248687)
AA seq 221 aa
MPGPTADLFADDALQQPAGREQIGEQSYVLRGYALPWIERLLPELRQVLAQSPFRQMVTP
GGFTMSAALSSCGDLGWTTDTSGYRYSPLDPRTQQPWPHMPDTLRQLAVLAAADAGFVDF
APDACLINRYVPGAKMSLHQDKNERRYSEPVVSVSLGLPAIFLFGGHERSAKAQKVSLFH
GDVVVWGGVDRLRFHGVMPIKDGVHPVMGPQRINLTFRTAG
NT seq 666 nt   +upstreamnt  +downstreamnt
atgcccggccccaccgctgacctgttcgccgatgacgccttgcagcaacccgctgggcgc
gaacaaattggcgaacagtcctacgtgctcaggggctacgccctgccctggattgagcgc
cttctgccggagttacggcaggtgctggctcaatcacccttccggcaaatggtcacaccc
ggtggcttcactatgtcggccgcattaagcagctgcggcgacctgggctggaccaccgac
acttccggttaccgctactcaccactcgacccgcgcacccagcagccctggccgcacatg
ccggacaccttgcggcaattggctgtgctggcggcggcagacgccggctttgtcgacttt
gcccccgacgcctgcctgatcaaccgttatgttccgggtgcaaagatgtccctgcaccag
gacaagaacgagcgccgctacagcgaaccggtggtgtcggtgtcgctggggttaccggcg
atttttctgtttggcgggcatgagcgcagtgccaaggctcagaaagtctcgctgttccat
ggcgacgtggtggtctggggcggtgtggaccgcctgcgttttcacggtgtgatgccgatc
aaggacggcgtgcacccggtcatggggccgcaacgcatcaacctgacctttcgcaccgcc
ggctga

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