Pseudomonas marginalis: U0037_15695
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Entry
U0037_15695 CDS
T10241
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pmab Pseudomonas marginalis
Pathway
pmab03420
Nucleotide excision repair
Brite
Enzymes [BR:
pmab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
U0037_15695
Transcription machinery [BR:
pmab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
U0037_15695
Chromosome and associated proteins [BR:
pmab03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
U0037_15695
DNA repair and recombination proteins [BR:
pmab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
U0037_15695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WQD69518
LinkDB
All DBs
Position
complement(3427473..3429728)
Genome browser
AA seq
751 aa
AA seq
DB search
MSYNVAVRALCEFTAKVGDLDLRFTPSPSAQEGIVGHRTVASRRSPHYQNEVALEGEYQQ
LKVRGRADGYDPDANRLEEVKTYRGDLDAQPANHRQLHWAQVKVYGWLMCQKLGLSQIDL
ALVYFDIVGEGETVLNQHFHASELEPFFNQQCALFLGWAQQEMAHREARNRAAQALAFPH
AGFRPGQRSLAESVYKAVSTGRCLMAQAPTGIGKTIGTIFPLLKALAPQQLDTLFFLTAK
TPGRKLALDAAHVLHTSSPELQLRVLELVARDKACEHLDNACHGDACPLAKGFYDRLPAA
RIAASKVRLLDQRNLRDVALAHDVCPYYLSQEMARWADLVVADYNYYFDFGAMLFGLAQL
NQWRAAVLVDEAHNLVERARSMYSASLDQYHLKTLRDVAPEPLKKPLQRLNREWNALHKD
QIAPYQAYAARPEKLLQALSLCASSMGEYFNEHPESLSGDLQAFYFEVLQFAKVAELFNE
HFIFDISKRQLSGKRSSSTLCLRNVVPAEFIRPRLTAARSSVLFSATLSPRHYYADLLGL
PADTAWIDVESPFKAEQLQVRIVDAVSTRFVHRHASLEPIVELIARQYTGQPGNYLAFFS
SFDYLQQVAQLLAERHPQITLWQQSRGMAEAERQAFLDQFTEHSQGVGFAVLGGAFGEGI
DLPGARLIGAFIATLGLPQLNPVNEQMKLRMGAIFGSGYDYTYLYPGIQKVVQAAGRVIR
SQQDRGVVMLIDDRFGEARVRQLLPRWWAVA
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
ttgagttacaacgttgccgtgcgtgcactgtgtgagttcacggccaaggtcggtgacctg
gacctgcgcttcacgccgtcgcccagcgcccaggaaggcattgtcggccaccgcaccgtc
gcctcgcggcgcagcccgcactaccagaatgaagtggcgctcgaaggtgagtaccagcaa
ctcaaggtgcggggcagggcggacggctacgacccggacgccaaccgcctggaagaagtg
aaaacctatcgcggcgacctcgacgcccaacccgccaaccaccggcaactgcattgggcc
caggtcaaagtgtacggctggttgatgtgccagaaactcggcctctcgcagatcgacctg
gcgctggtgtacttcgacatcgtcggcgagggcgagacggtgctcaaccaacacttccac
gccagcgaactggagccgttcttcaaccagcaatgcgcgctgttcctcggttgggcccag
caggaaatggcgcaccgcgaagcgcgcaacagggccgcgcaggccctggcgtttccccat
gccggttttcgtcctggccagcgctcgcttgctgaatcggtgtacaaggccgtcagtacc
ggccgctgcctgatggcccaggcgcctaccggcatcggcaagaccatcggcacgattttc
ccgttgctcaaggccctggcgccccagcaactggacacgctgttcttcctcaccgccaaa
acccccggccgcaagctcgccctggacgccgcccacgtgctgcacaccagcagccccgag
ctgcaattgcgcgtcctggagctggtggcgcgggacaaagcctgcgagcacctggacaac
gcctgtcacggcgacgcctgtcccttggccaagggtttctacgatcgcttgcccgccgcg
cgcatcgccgcgtccaaggtgcgcctgctggaccagcgcaacctgcgcgacgtggccctg
gcccatgacgtctgtccctattacctgagccaggaaatggcgcgctgggccgacctggtg
gtcgccgactacaactactatttcgattttggcgccatgctgttcggcctggcccagctc
aaccagtggcgcgcggcagtgctggtggacgaggcgcacaacctggtcgaacgggcccgc
tcgatgtacagcgcgagcctcgaccaataccacctcaagaccctgcgcgacgtcgcgccc
gagcccttgaaaaaacccttgcagcgcctcaaccgtgagtggaacgcactgcacaaggac
cagatcgcgccctaccaggcttatgccgcccgcccggaaaaactgttgcaggccctgagc
ctgtgcgccagcagcatgggcgagtatttcaatgagcatcccgaatcgctcagcggcgac
ctgcaagccttctatttcgaggtgctgcaatttgccaaagtcgccgagctgttcaacgaa
cacttcattttcgacatcagcaaacgccagctcagcggcaaacgcagcagctcaaccctg
tgcctgcgcaacgtggtgcccgccgaattcatccgcccacgcttgaccgcggcccgcagc
agcgtgctgttttccgcgaccctgagcccccgtcattactacgcggatttgctcggtttg
ccggcggacacggcctggatcgatgtggagtcgccgttcaaggccgagcaattgcaggtg
cgcatcgtcgatgcggtctccacgcgtttcgtgcatcgccacgcctctttggaacctatc
gttgagctgatcgcccgccaatacaccgggcagcctggcaactacctggcgttcttctca
agcttcgattacctgcagcaggtggcgcagttgctggccgagcgacacccgcagatcaca
ctctggcaacagtcacgcggcatggccgaggccgagcgccaggcgttcctcgaccaattc
accgaacacagccagggtgtcggctttgccgtgctcggcggcgcctttggtgaaggcatc
gacctgcccggcgcccgtttgatcggcgccttcatcgccaccctcgggttgccccaactc
aacccggtcaatgaacagatgaaactgcgcatgggcgcgatcttcggttcaggctacgac
tacacctacctgtaccccggcattcagaaagtggtgcaggcagcgggcagggtcatccgc
agccagcaggaccgtggcgtggtgatgttgatcgatgaccgcttcggcgaagcgcgggta
cggcagttgttgccgcgttggtgggcggttgcatga
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