Pseudomonas marginalis: U0037_16140
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Entry
U0037_16140 CDS
T10241
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pmab Pseudomonas marginalis
Pathway
pmab00040
Pentose and glucuronate interconversions
pmab01100
Metabolic pathways
pmab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
U0037_16140
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U0037_16140
Enzymes [BR:
pmab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
U0037_16140
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Motif
Pfam:
Pectate_lyase_4
Lectin_like
Motif
Other DBs
NCBI-ProteinID:
WQD69603
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Position
3569531..3570673
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AA seq
380 aa
AA seq
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MTTPSTFTACKLASAIFGVLVLGSLPAHAADIWLDSATTGWATQNGGTKGGSKAAAANIY
TVKNAAELKTALSASVGTNGRIIKITGVIDVSEGKAYTTTADMKKRGRLDIPGKTTIVGT
SSTAEIREGFFYAKENDVIIRNLTIENPWDPEPIWDANDGKEGNWNSEYDGLTIEGANNV
WVDHVTFTDGRRTDAQNGTANGRPKQHHDGALDVKNGANYVTISYTAFKSHEKNNLIGSS
DSRTTDDGKLKVTIHNSLFENISARAPRVRFGQVHLYNNYHVGSTSDKVYPFSYAHGVGK
GSKIFSEKNAFEISGISGCDKIAGDYGGSVYRDSGSTLNGSALTCPWTASIGWTPPYNYT
PLAADKVAADVKAKAGAGKL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaccatcaaccttcaccgcgtgcaaactggccagtgctattttcggcgtactc
gtgcttggcagcttgccggctcacgctgcggacatttggctggattcggccacgaccggc
tgggccactcagaatggcggcaccaagggcggctccaaggctgccgcggctaacatctac
acggtcaaaaacgctgccgagttgaaaaccgcactgagtgcttcggtgggaaccaacgga
cgcatcatcaagatcaccggcgtgatcgacgtcagtgaaggcaaggcttatacgacgact
gcggatatgaagaagcgtggccgtctggatattcccggcaaaaccaccatcgtcggcacc
agcagcaccgccgaaatccgcgaaggtttcttctacgccaaagaaaacgacgtgatcatt
cgcaacctcaccatcgagaacccttgggacccagagccgatctgggatgccaatgatggc
aaggaaggtaactggaactccgaatacgatggtttgaccatcgaaggcgccaacaacgtg
tgggttgaccatgtcaccttcaccgacggccgccgcaccgatgcgcagaacggcaccgct
aacggtcgcccgaaacagcaccacgacggcgccctggacgtgaaaaacggcgccaactac
gtgaccatttcgtacaccgccttcaagtcccacgagaagaacaacctgatcggttcgagc
gacagccgcaccaccgatgacggcaagctcaaggtgacgatccacaactccctgttcgag
aacatttcggcccgcgccccgcgcgtgcgcttcggccaggtgcacctgtacaacaactac
cacgtgggtagcaccagcgataaggtctaccccttctcgtacgcgcatggcgtcggcaaa
ggctcgaaaatcttctccgagaaaaacgcgttcgagatcagcggcatcagtggctgcgac
aaaatcgccggcgactacggtggcagcgtataccgcgacagcggctcgaccctcaatggc
agcgccttgacctgcccctggaccgcaagcatcggctggaccccgccttacaactacaca
ccgctggcggcggacaaagtcgctgcagacgtcaaggccaaggccggcgccggcaagctc
tga
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