KEGG   Pseudomonas marginalis: U0037_16140
Entry
U0037_16140       CDS       T10241                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
pmab  Pseudomonas marginalis
Pathway
pmab00040  Pentose and glucuronate interconversions
pmab01100  Metabolic pathways
pmab02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pmab00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    U0037_16140
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    U0037_16140
Enzymes [BR:pmab01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     U0037_16140
SSDB
Motif
Pfam: Pectate_lyase_4 Lectin_like
Other DBs
NCBI-ProteinID: WQD69603
LinkDB
Position
3569531..3570673
AA seq 380 aa
MTTPSTFTACKLASAIFGVLVLGSLPAHAADIWLDSATTGWATQNGGTKGGSKAAAANIY
TVKNAAELKTALSASVGTNGRIIKITGVIDVSEGKAYTTTADMKKRGRLDIPGKTTIVGT
SSTAEIREGFFYAKENDVIIRNLTIENPWDPEPIWDANDGKEGNWNSEYDGLTIEGANNV
WVDHVTFTDGRRTDAQNGTANGRPKQHHDGALDVKNGANYVTISYTAFKSHEKNNLIGSS
DSRTTDDGKLKVTIHNSLFENISARAPRVRFGQVHLYNNYHVGSTSDKVYPFSYAHGVGK
GSKIFSEKNAFEISGISGCDKIAGDYGGSVYRDSGSTLNGSALTCPWTASIGWTPPYNYT
PLAADKVAADVKAKAGAGKL
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgacaacaccatcaaccttcaccgcgtgcaaactggccagtgctattttcggcgtactc
gtgcttggcagcttgccggctcacgctgcggacatttggctggattcggccacgaccggc
tgggccactcagaatggcggcaccaagggcggctccaaggctgccgcggctaacatctac
acggtcaaaaacgctgccgagttgaaaaccgcactgagtgcttcggtgggaaccaacgga
cgcatcatcaagatcaccggcgtgatcgacgtcagtgaaggcaaggcttatacgacgact
gcggatatgaagaagcgtggccgtctggatattcccggcaaaaccaccatcgtcggcacc
agcagcaccgccgaaatccgcgaaggtttcttctacgccaaagaaaacgacgtgatcatt
cgcaacctcaccatcgagaacccttgggacccagagccgatctgggatgccaatgatggc
aaggaaggtaactggaactccgaatacgatggtttgaccatcgaaggcgccaacaacgtg
tgggttgaccatgtcaccttcaccgacggccgccgcaccgatgcgcagaacggcaccgct
aacggtcgcccgaaacagcaccacgacggcgccctggacgtgaaaaacggcgccaactac
gtgaccatttcgtacaccgccttcaagtcccacgagaagaacaacctgatcggttcgagc
gacagccgcaccaccgatgacggcaagctcaaggtgacgatccacaactccctgttcgag
aacatttcggcccgcgccccgcgcgtgcgcttcggccaggtgcacctgtacaacaactac
cacgtgggtagcaccagcgataaggtctaccccttctcgtacgcgcatggcgtcggcaaa
ggctcgaaaatcttctccgagaaaaacgcgttcgagatcagcggcatcagtggctgcgac
aaaatcgccggcgactacggtggcagcgtataccgcgacagcggctcgaccctcaatggc
agcgccttgacctgcccctggaccgcaagcatcggctggaccccgccttacaactacaca
ccgctggcggcggacaaagtcgctgcagacgtcaaggccaaggccggcgccggcaagctc
tga

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