Pseudomonas marginalis: U0037_16315
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Entry
U0037_16315 CDS
T10241
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K04033
AraC family transcriptional regulator, ethanolamine operon transcriptional activator
Organism
pmab Pseudomonas marginalis
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmab03000
]
U0037_16315
Transcription factors [BR:
pmab03000
]
Prokaryotic type
Helix-turn-helix
AraC family
U0037_16315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
SeqA_N
Motif
Other DBs
NCBI-ProteinID:
WQD69635
LinkDB
All DBs
Position
complement(3616239..3617231)
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AA seq
330 aa
AA seq
DB search
MNNNNVRMPAASVVLPPALPLQRFLTSDIDEHARNMGGWQVRYDQLSPGAFEGELVEFRS
GWMQLVRDRSNQAMIKSGAAWKGAITFSLPLSADGPVYCSGHPIHAPSLLVAHGENLPEL
HTPQHLDLLSVAIEEHALAHVLERQGSEFRITDLPKCYRLGDSSVQRELAGLFDALAGCD
QGRDAVLGHDSIRRGIRDAVMLHVLELIAPDQAPPLNPTARKRMVDRAREYALSHLDEPL
SILDLCNHIGASRRKLQYCFQETLGINPVAYLRALRLNAVRRELRTRTQSHGVQEVAARW
GFWHLSRFSSDYRTMFGESPSQTLRRTQLC
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaacaataataatgtgcggatgcctgcggcctcggtggtgcttccaccggcgttaccc
ctccagcgttttctgaccagcgacatcgatgaacacgcgcgcaatatgggtggctggcag
gttcggtacgatcagttatcgccgggcgcctttgaaggtgagctggtggagttccgttcg
ggctggatgcaactggtgcgcgaccgctctaatcaggccatgatcaagagtggtgcagcc
tggaaaggcgcaatcaccttcagccttcccttgagtgccgacggcccggtgtattgctcg
ggtcacccgatccatgcgcccagcctgttggtggcccacggtgaaaaccttcccgagctg
cacacgccacagcacttggatttgctcagtgtggccattgaagaacacgcactggcacac
gtcctggagcgtcagggcagtgagtttcgaattaccgatcttcccaagtgttaccgcttg
ggtgattcatctgtgcaacgtgaactcgcagggttgttcgatgcgctggcgggttgcgac
cagggccgtgatgccgtgctggggcatgactcgatccggcgcggcatacgggatgcggtg
atgctgcacgtgctggagttgatcgcgccggaccaggcgccaccccttaacccgacggcg
cgcaaaaggatggtcgaccgggcgcgcgaatatgcgctgagccacctcgacgaaccgctg
tcgatcctcgacctgtgcaaccacatcggcgccagccggcgcaaacttcaatactgtttc
caggaaaccctgggcatcaacccggtggcctatctgcgtgcgctgcgcctcaatgcggtg
cgccgcgaactgcgaacccgcacccaatcccatggcgtacaagaagtggcggcgcgttgg
gggttctggcatttgagtcggttctcgagcgattaccgcaccatgtttggcgaaagccca
tcacagaccctgcgtcgcactcaactctgctga
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