Pseudomonas marginalis: U0037_17730
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Entry
U0037_17730 CDS
T10241
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pmab Pseudomonas marginalis
Pathway
pmab02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
U0037_17730 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmab02044
]
U0037_17730 (tssC)
Secretion system [BR:
pmab02044
]
Type VI secretion system
Imp/Vas secretion system core components
U0037_17730 (tssC)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
WQD69902
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All DBs
Position
complement(3933375..3934850)
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AA seq
491 aa
AA seq
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MTTPQHALPAQTADEYSILDNIVAQTLLSADDEAYGIAKRGVSAFIEELIKPQNRGEPVK
KRLVDRMIAEIDTKLSLQMDEILHHPDFQALEASWKGLQLLVDRTDFRENIKIELLNVSR
QDLLEDFEDSPEVTQSGLYKHIYSAEYGQFGGQPVGAIIANYFLSPSAPDVKLMQYASSV
ACMAHAPFIAAAAPAFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYIGLTVP
RFLLRTPYDPLECPVKTFAYQENVVNSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGP
QSGGAVEDLPLHHFHSMGEIETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFSA
SSVQKPKHFGLSPEGKEAELNYRLGTQLPYMMVVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAARIVVSDVEGEPGWYRVNLSVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaccacaacacgcgctaccggcacaaaccgctgatgaatacagcatcctcgac
aacatcgttgcccagacgctactgagtgccgatgacgaagcgtatggcattgccaaacgg
ggtgtctcggcgtttatcgaagagttgatcaagccgcagaaccgtggcgagccggtaaaa
aaacgcttggtcgaccggatgattgccgagatcgacaccaagctcagtctgcaaatggac
gagatattgcaccacccggactttcaggccctggaagcgtcctggaaagggctccagttg
ttggtggatcgcaccgactttcgcgaaaacatcaagatcgaactcttgaacgtttcccgg
caagacctgctggaagacttcgaagactcaccggaagtgacccagtcgggcttgtacaaa
catatctacagtgctgaatacggccagtttggcggtcagcctgtgggcgcgatcattgcc
aactattttctgtcgcccagcgcgcctgatgtaaagctgatgcaatacgcttccagtgtg
gcttgcatggcgcatgcgccctttatcgccgcagccgcgccagcgttcttcgggttggag
agcttcaccggcttaccggatctcaaagatctgaaggaccatttcgaaggcccgcaattt
gccaaatggcaaagctttcgccagagcgaggacgcgcgttacatcgggttgaccgtgccg
cgtttcttgctccgtacgccttatgaccccctcgaatgcccggtcaagacctttgcctac
caggaaaacgtggtcaacagccacgaacattacctgtggggcaatacagcctacgccttt
gccacgcgcctgaccgatagcttcgcgcgctttcgctggtgcccgaacatcatcggcccg
caaagcggtggcgcggtagaagacttgccgttgcatcacttccacagcatgggggagatt
gaaaccaagatcccgaccgaagtgctggtttccgaccgtcgtgaatacgaactggcgcaa
gagggcttcattgccttgacgatgcgcaagggcagtgacaacgccgcgttcttctctgcc
agctcggtacaaaagccgaaacacttcggcctcagccccgagggcaaggaagcagagctg
aattaccgcttgggaacacagttgccctacatgatggtggtcaatcgcctggcccattac
ctcaaggtccttcagcgcgaacaactgggttcatggaaggagcgcaccgacctggagctg
gagctcaataaatggattcgccagtacgtcgccgaccaggaaaaccccagtgccgaagtg
cgcgggcggcgccccttgcgcgcagcacgcatcgttgtcagtgatgtcgagggtgagcct
ggctggtatcgcgtcaacctgagtgtgcgaccgcacttcaagtacatgggggcggatttc
acgctgtccctggttggcaagctcgataaagaatga
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