KEGG   Pseudomonas marginalis: U0037_17775
Entry
U0037_17775       CDS       T10241                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pmab  Pseudomonas marginalis
Pathway
pmab00300  Lysine biosynthesis
pmab00470  D-Amino acid metabolism
pmab01100  Metabolic pathways
pmab01110  Biosynthesis of secondary metabolites
pmab01120  Microbial metabolism in diverse environments
pmab01230  Biosynthesis of amino acids
Module
pmab_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pmab00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    U0037_17775 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    U0037_17775 (dapF)
Enzymes [BR:pmab01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     U0037_17775 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: WQD69911
LinkDB
Position
complement(3942795..3943598)
AA seq 267 aa
MLLPFVKMHAHGDDFIIIDRRGLDDPITAAIARQLGNRHTGIGFNQLAVVYDCEEAAARI
SFWNANGTPLATCGSATRGVADRLMHETGKDSIVLRTDRGLLTCVRAPGRQVSVDMGEPS
LEWTAVPLSDAMDTLTLPVEGSPAACSMGNPHCTFFVDDIAAVDVAGLGPALEIHPLFPA
RTNVHFVQVLDRSHIRLRIWERGGGVALGSGSCCCGAVVNGIRRGLLDATVQVQCDGGTV
TVQWTGEGGVVLTGSVEPVMQGSAYVP
NT seq 804 nt   +upstreamnt  +downstreamnt
atgcttttgccgttcgtaaagatgcacgcccacggcgacgacttcatcatcattgatcgc
cgtggcttggacgatccgatcaccgcggccattgcccgtcagttgggcaaccgtcacacc
ggtatcggcttcaaccaattggccgttgtgtacgattgtgaagaggcggccgcacgtatc
agcttctggaacgccaacggcacgccgctggccacttgcggcagcgctacccgtggcgtg
gccgatcggttgatgcatgaaaccggcaaggattcgatcgtgctgcgtaccgaccgcggc
ctgctgacctgcgtgcgtgcgccggggcggcaagtgtcggtggacatgggcgagccctcg
ctggagtggacggccgtgcctctgtccgacgcgatggacaccttgacattgcctgtcgaa
ggcagcccggcggcgtgcagcatgggcaacccccactgtacgtttttcgtcgacgacatc
gcggctgtcgacgtagcaggcctgggcccggcgttggagattcatccgctgttcccggcc
aggaccaatgtgcatttcgtgcaagtgctcgaccgtagccatatccgcctgcgcatctgg
gagcgcggtggcggtgtggcgttggggtcggggtcgtgctgctgtggggcggtagtcaat
gggatccggcgcgggctgctggatgccactgtgcaggtgcagtgcgacggcggcacggtg
accgtgcagtggacgggcgagggcggtgtggtattgaccggcagtgtggagccggtgatg
cagggcagcgcctacgtgccttga

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