Pseudomonas marginalis: U0037_20170
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Entry
U0037_20170 CDS
T10241
Symbol
gabT
Name
(GenBank) 4-aminobutyrate--2-oxoglutarate transaminase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
pmab Pseudomonas marginalis
Pathway
pmab00250
Alanine, aspartate and glutamate metabolism
pmab00280
Valine, leucine and isoleucine degradation
pmab00310
Lysine degradation
pmab00410
beta-Alanine metabolism
pmab00640
Propanoate metabolism
pmab00650
Butanoate metabolism
pmab01100
Metabolic pathways
pmab01120
Microbial metabolism in diverse environments
Module
pmab_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
U0037_20170 (gabT)
00650 Butanoate metabolism
U0037_20170 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
U0037_20170 (gabT)
00280 Valine, leucine and isoleucine degradation
U0037_20170 (gabT)
00310 Lysine degradation
U0037_20170 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
U0037_20170 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmab01007
]
U0037_20170 (gabT)
Enzymes [BR:
pmab01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
U0037_20170 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
U0037_20170 (gabT)
2.6.1.48 5-aminovalerate transaminase
U0037_20170 (gabT)
Amino acid related enzymes [BR:
pmab01007
]
Aminotransferase (transaminase)
Class III
U0037_20170 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
DUF3933
Motif
Other DBs
NCBI-ProteinID:
WQD70369
LinkDB
All DBs
Position
complement(4462102..4463394)
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AA seq
430 aa
AA seq
DB search
MNSKVDETPHLLRQREQFVPRGLVTAHPLVIDRAQGAELWDVDGKRYLDFVGGIGVLNIG
HNHPKVVAAVQAQLQKVSHACFQVVAYQPYLDLAQRLCEMIGGQEAYKAAFFTSGAEAVE
NAVKIARAHTNRSAVIAFRGGFHGRTLLGTTLTGMSQPYKQNFGPFAPEVFHTPYPNAYR
GVTSEVALKALDELLATQVAPERVAAIIIEPVQGDGGFLTAPPAFLQALRALADKHGIVL
ILDEIQTGFGRTGTWFGFQHAGIQPDLVTVAKSLAGGLPLSGVVGKAQIMDAPLPGGLGG
TYGGNALACAAALAVITAFEDEHLLARSQVLAERLRHGLLGLQARYPNIGDVRGTGFMLA
IELIKDDAARTPDADLNQRVIDEARAGGLLVIKCGVHRNVLRFLAPLVTTEAQVDEALQI
LDAALARVLN
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcaaagtcgacgaaacccctcatttgctccgtcagcgcgagcagttcgtgccc
cgtgggctggttaccgcgcacccgctggtgatcgaccgcgcccagggcgccgagttgtgg
gacgtggatggcaagcgttacctggattttgtcggcggtatcggcgtgctcaacattggt
cacaaccaccccaaggtggtcgccgccgtgcaggcccaattgcagaaggtgtcccacgcc
tgcttccaggtggtggcgtaccagccttatctcgacctggcccagcgcctgtgcgaaatg
atcggcggtcaggaggcctataaagcggcgttcttcacctccggcgccgaggcggtggaa
aatgcggtgaagatcgcccgcgcccacaccaatcgttcggcggtgattgcttttcgtggt
ggcttccacggccgcacgttgctcggcaccacgctcaccggcatgagccaaccctacaaa
cagaacttcgggccatttgcgccggaagtgtttcataccccctatccgaacgcgtatcgc
ggggtgaccagcgaggtcgcgctcaaggcccttgatgagttgctggccacccaggtggcg
ccggagcgtgtggcggcaatcatcattgagccggtgcagggcgacggtggtttcctgacc
gcgccgccggcgttcctgcaggcgctgcgtgccttggcagacaagcacggcatcgtgctg
attcttgacgagatccagaccggcttcggtcgcaccggcacctggttcggtttccagcac
gccggcatccagcccgatttggtcaccgtggccaagagcctggccggtggcctgccgttg
tccggtgtggtcggcaaggcgcagatcatggacgcacccctgcccggcgggctgggtggc
acttacggcggcaacgcgctggcctgcgcggcagcattggcggtgatcacggcattcgaa
gacgaacacttgttggcccgcagccaagtgctggccgagcgcctgcgccacggcttgctc
ggcttgcaggcgcgctacccgaacatcggcgacgtgcgcggcaccggctttatgctggcc
atcgagttgatcaaggatgacgcggcgcgtaccccggatgccgacctcaatcaacgggtc
atcgatgaggcccgtgccggcggtttgctggtcatcaagtgcggcgtgcaccgcaacgtg
ctgcgcttcctcgcaccgctggtgaccaccgaggcccaggttgacgaagcgctgcagatt
ctcgacgccgcgttggcacgggtcttgaactga
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