Pseudomonas marginalis: U0037_22695
Help
Entry
U0037_22695 CDS
T10241
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pmab Pseudomonas marginalis
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmab03009
]
U0037_22695
Enzymes [BR:
pmab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
U0037_22695
Ribosome biogenesis [BR:
pmab03009
]
Prokaryotic type
rRNA helicases
U0037_22695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Abhydrolase_1
Motif
Other DBs
NCBI-ProteinID:
WQD70838
LinkDB
All DBs
Position
complement(4990539..4991885)
Genome browser
AA seq
448 aa
AA seq
DB search
MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPILN
RLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRK
VPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVAECINRQQTM
LFSATTGGSTLREMVAKVLNNPEHLQVNNVSDLNATTRQQIVTADHNVHKEQILNWLLAN
ETYQKAIVFTNTRAAADRIYGRLVAQEYKAFVLHGEKDQKDRKLAIDRLKAGGVKILVAT
DVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIER
YLKQSFERRTIKEVKGTYTGPKKVKASGKAVGVKKKKTDAKGDKKKAGAKSPTKRKIANR
PKTDNLSLVSKDGMAPLKRRKPEAPAAE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgctcaaagccgtggccgagcttaaattt
gtcgagcctacgccggtgcaagcagcggccatcccgctcgcgctcgaagggcgtgacctg
cgggtgacggctcaaaccgggagtggcaagaccgccgctttcgtcctgccgattttgaat
cgcctgatcggcccggccaaagtccgcgtcagcatcaagaccctgatcctgctgccgacc
cgcgagctggcccagcagaccttgaaggaagtggagcgcttctcgcagttcaccttcatc
aagtccggcctgatcaccggcggtgaagacttcaaggtgcaggccgccatgctgcgcaag
gtgccggacatcctgatcggcaccccaggccgcatgatcgagcagctcaacgccggcaac
ctcgacctcaaggaagtcgaagtgctggtgctcgacgaagccgaccgcatgctcgacatg
gggtttgccgatgacgtgcagcgcctggtggccgagtgcatcaatcgccagcagaccatg
ctgttctccgccaccaccggcggttccaccctgcgcgagatggtcgccaaggtgctgaac
aaccctgagcacctgcaggtcaacaacgtcagcgacctcaacgcgaccacgcgccagcag
atcgtcaccgctgaccacaatgtgcacaaagagcagatcctcaactggctgttggccaac
gagacctatcagaaagccatcgtgttcaccaatacccgcgctgccgccgaccgtatctac
ggccgcctggttgcccaggaatacaaggcgttcgtgctgcacggcgagaaagaccagaag
gaccgcaagctggccatcgaccgcctcaaggccggcggtgtgaagatcctcgtggccacc
gacgttgccgcgcgcggcctggacgtggacggcctggacctggtgatcaacttcgatatg
ccacgcagtggcgacgaatatgtgcaccgcatcggccgtaccgggcgtgccggcaatgat
ggcctggcgatctcgctgatctgccatggcgactggaacctgatgtcgagcatcgagcgc
tacctcaagcagtcgttcgagcgtcgcaccatcaaagaagtcaaaggcacctacaccggg
ccgaagaaggtcaaggcatcgggcaaggccgttggcgtgaagaagaaaaagaccgacgcc
aagggcgacaagaaaaaggccggcgccaagtcgccgaccaaacgcaagattgccaaccgg
ccgaagaccgacaacctgtcgctcgtcagcaaggacggcatggcgccactcaaacgccgc
aagccggaagcgccggctgctgaataa
DBGET
integrated database retrieval system
