Pseudomonas marginalis: U0037_23295
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Entry
U0037_23295 CDS
T10241
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
pmab Pseudomonas marginalis
Pathway
pmab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U0037_23295 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmab02000
]
U0037_23295 (choX)
Transporters [BR:
pmab02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
U0037_23295 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
WQD70952
LinkDB
All DBs
Position
complement(5128889..5129824)
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AA seq
311 aa
AA seq
DB search
MNKFYKTVIALTLASQSVLVIAQEPSSCQVIKTANVGWLDGISTNALTQVVAEGLGYKFD
DSMLSLPIVLKSLSDGKLDTFINYWSPSQDPLITPLKDALSVLPAPNLTGAKYTLAVPKF
LADEGLKDFKDIEKFKVQLGGRIYGIQPGSGGNTLVQKIIKDNSYGLKDFKLVESGEAGM
IQEVGRSIQRKKPIVFLAWAPHPMNVNMDIVYLTGGDDSFGPDFGAATVKTITSKGYAER
CGNVGKLYSNLKFTVDMESSIMNALDKKEPALSAAKKWLAAHPETLDSWLAGVTTVDGKD
AKAAVLANISK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagttttacaaaaccgtgatcgcattaaccttggcatctcaaagcgtgttggtt
atagctcaagaacccagcagttgccaagtcatcaagacggcgaacgtgggatggctcgat
ggtatatcgacaaacgcattgactcaggtggttgccgaaggcctgggctataaatttgac
gacagcatgctttcacttccaatcgttctgaagtctcttagcgatggcaagctggatacg
ttcattaactactggtcgccatctcaggatcctctgattacccccctaaaggacgctttg
tccgttctcccggcccctaacctcacaggtgcaaaatacacactcgcagttccaaaattt
ctggccgatgaggggttgaaggatttcaaggacatcgagaaatttaaagttcagctcgga
ggccgcatttacggcatccagcctggtagcggcggaaacacgttggtgcagaagatcatc
aaggacaactcgtatggtttgaaggatttcaaactggtcgagtctggtgaagcaggcatg
atccaagaggtaggtcgctcgattcaacgcaagaagcccattgtgttcctggcgtgggcg
cctcacccaatgaacgtgaacatggacatcgtgtatctaacgggtggtgatgattccttc
ggtcccgatttcggcgcagcaacggtcaaaaccatcacatccaaaggctatgccgagcgc
tgcggtaacgttggcaagttgtacagcaatctgaaattcacggtcgacatggagagcagc
atcatgaacgccctcgacaaaaaggagcccgctttgagtgcagcaaaaaaatggctggcc
gctcatcctgagactctggatagctggctggctggtgtgactaccgtcgacggtaaagac
gcgaaagcagcagtattagcaaacatctccaagtaa
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