KEGG   Pseudomonas marginalis: U0037_23895
Entry
U0037_23895       CDS       T10241                                 
Name
(GenBank) type II toxin-antitoxin system VapC family toxin
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
pmab  Pseudomonas marginalis
Brite
KEGG Orthology (KO) [BR:pmab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pmab03016]
    U0037_23895
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pmab02048]
    U0037_23895
Transfer RNA biogenesis [BR:pmab03016]
 Prokaryotic type
  tRNA degradation factors
   U0037_23895
Prokaryotic defense system [BR:pmab02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    U0037_23895
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: WQD71065
LinkDB
Position
complement(5256052..5256456)
AA seq 134 aa
MIKYMLDTNIVIYIIKRRPIEILEKFNANVGRMVISSITLAELMHGAEKSQLVEKNTRAV
EDFSSRLDVLSYDDKAAFHYGSIRSDLEKKGTPIGVNDLHIAGHARSSGLVLVTNNEGEF
KRVNGLIVENWIGA
NT seq 405 nt   +upstreamnt  +downstreamnt
atgattaagtacatgcttgataccaacatcgtgatctacatcatcaagcgtcggccgatt
gagatactggagaaattcaacgccaacgtagggcgcatggttatctcctcaatcaccctc
gcagagctgatgcatggcgcagaaaagagtcagcttgtagaaaaaaacacgcgcgccgtg
gaagacttctcttcccggctcgatgtccttagctacgacgacaaggcggcttttcactac
ggctcgatccgttcagacctggagaaaaagggcacgcctattggcgtcaatgacctacac
attgccgggcacgctagaagctcaggcttggtgttggtgactaacaatgagggtgagttc
aagcgcgtaaatggcttgattgtggagaactggataggcgcctag

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