Pseudomonas marginalis: U0037_24195
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Entry
U0037_24195 CDS
T10241
Symbol
fadD2
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD2
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pmab Pseudomonas marginalis
Pathway
pmab00061
Fatty acid biosynthesis
pmab00071
Fatty acid degradation
pmab01100
Metabolic pathways
pmab01212
Fatty acid metabolism
pmab02024
Quorum sensing
pmab04146
Peroxisome
Module
pmab_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
U0037_24195 (fadD2)
00071 Fatty acid degradation
U0037_24195 (fadD2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
U0037_24195 (fadD2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
U0037_24195 (fadD2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pmab01004
]
U0037_24195 (fadD2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmab04147
]
U0037_24195 (fadD2)
Enzymes [BR:
pmab01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
U0037_24195 (fadD2)
Lipid biosynthesis proteins [BR:
pmab01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
U0037_24195 (fadD2)
Exosome [BR:
pmab04147
]
Exosomal proteins
Exosomal proteins of breast milk
U0037_24195 (fadD2)
Exosomal proteins of breast cancer cells
U0037_24195 (fadD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WQD71122
LinkDB
All DBs
Position
complement(5308891..5310579)
Genome browser
AA seq
562 aa
AA seq
DB search
MQPDFWNDKRAAGVPNDIDLAAYKSVIEVFERSCKAFADRPAFSNMGITLTYAELERQSA
AFAGYLQQHTDLKPGERIAVQMPNVLHYPVAVFGALRAGLIVVNTNPLYTPREMRHQFKD
AGVRALVYLNLFGSRVQEVCSDTEIDYLIEAKMGDFMPAAKGWLVNTLVDKVKKMVPAYS
LPRAVSFKRALRMGAGLGVTRHPVTLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMQQVR
ACMSQTGEDGHPLIKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIGGFI
KELKKWRFTGLLGLNTLFVALMDHPDFKSLDFSHLKLTNSGGTALIKATAERWEQITGCA
IGEGYGLTETSPVASTNPYGNKSRLGTVGIPVPATAMKVIDDQGLQLPLGERGELCIKGP
QVMKGYWQQPAATAEALDAEGWLKTGDIAVIDDDGFVRIVDRKKDLIIVSGFNVYPNEIE
DVVMAHPAVANCAVIGVPDDRTGEAVKLFVVARAQGVSLEELKAYCKTNFTGYKVPKHIV
LRESLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgatttctggaatgacaaacgcgcggcgggcgtacccaatgacatcgacctc
gcggcctacaagtcggtgatcgaagtcttcgagcgttcctgcaaggcctttgccgaccgt
ccggcattcagcaacatgggcatcaccctgacctacgccgagcttgaacgccagagcgcg
gcgttcgccggctacctgcagcagcacaccgacctcaagccgggcgagcgcatcgcggtg
cagatgcccaacgtgctgcattacccggttgccgtgttcggtgccttgcgcgccgggctg
atcgtggtcaacaccaacccgctgtacaccccgcgcgagatgcgtcaccagttcaaggat
gccggtgtacgtgcgttggtctacctcaacctcttcggttcgcgggtgcaagaggtgtgc
agcgacaccgagatcgactacctgatcgaagccaagatgggcgacttcatgcccgccgca
aagggttggctggtgaacaccctggtcgacaaggtcaagaagatggtcccggcctacagc
ctgccgcgcgcggtgtcgttcaagcgcgccctgcgcatgggcgcaggcctgggggtgacc
cgccacccggtgaccctggatgacatcgccgtgctgcaatacaccggcggcaccactggc
ttggccaagggcgcgatgctcacccacggcaacctggtggcaaacatgcaacaggtgcgc
gcctgcatgtcccagaccggcgaggacggccatccactgatcaaggaagggcaggaggtg
atgatcgcgccgctgccgctttaccacatctatgctttcaccgcgaattgcatgtgcatg
atggtgtccggcaatcacaacgtgctgatcaccaacccgcgcgacatcggcggctttatc
aaggagcttaaaaagtggcgctttaccgggctgttggggctcaacacgctgtttgtggcc
ttgatggaccacccggatttcaaaagcctggatttttcccacctcaagctcaccaactcc
ggcggcaccgcgctgatcaaggccacggccgagcgctgggagcagatcaccggctgtgcg
ataggcgagggctacggtctcaccgaaacgtcccctgtggccagcaccaacccctacggc
aacaaatcacgcctgggcaccgtgggcattcctgtgccagccacggcaatgaaggtgatt
gatgaccagggcctccaactgccgttgggtgaacgcggcgagctgtgcatcaagggcccg
caggtgatgaagggctactggcagcaaccggctgccaccgccgaagcgctggacgccgaa
ggttggctgaagaccggcgacattgcagtgatcgatgacgatggctttgtgcgcattgtc
gaccgcaagaaggacctgatcatcgtctcgggcttcaacgtgtaccccaacgagatcgaa
gacgtggtgatggcccacccggcggtggccaactgtgccgtgatcggcgtaccggatgat
cgcaccggggaggcggtgaagctgtttgtggtggcgcgtgcgcaaggggtgagccttgag
gaattgaaggcgtactgcaagaccaacttcacggggtacaaggtgcccaagcatattgtg
ttgcgtgagtcgttgccgatgacaccggttggcaagattttgcggcgtgagctgcgcgac
atcgcctga
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