Pseudomonas marginalis: U0037_24615
Help
Entry
U0037_24615 CDS
T10241
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pmab Pseudomonas marginalis
Pathway
pmab00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
U0037_24615 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmab01007
]
U0037_24615 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmab03016
]
U0037_24615 (aspS)
03029 Mitochondrial biogenesis [BR:
pmab03029
]
U0037_24615 (aspS)
Enzymes [BR:
pmab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
U0037_24615 (aspS)
Amino acid related enzymes [BR:
pmab01007
]
Aminoacyl-tRNA synthetase
Class II (A)
U0037_24615 (aspS)
Transfer RNA biogenesis [BR:
pmab03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
U0037_24615 (aspS)
Prokaryotic type
Other AARSs
U0037_24615 (aspS)
Mitochondrial biogenesis [BR:
pmab03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
U0037_24615 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
WQD71200
LinkDB
All DBs
Position
complement(5395695..5397470)
Genome browser
AA seq
591 aa
AA seq
DB search
MMRSHYCGQLNETLEGQEITLCGWVHRRRDHGGVIFLDIRDRDGLAQVVFDPDRAESFAA
ADRVRSEYVVKITGKVRLRPAGAVNKNMASGGIEVLGYELEVLNESETPPFPLNEYSDVG
EETRLRYRFLDLRRPEMAEKLRLRSRMTTSIRRFLDENGFLDVETPILTRATPEGARDYL
VPSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETS
FLDEKEIMGLTEQMIRNLFKEVLDLEFGDFPHMTFEEAMRRYGSDKPDLRNPLELVDVAD
QLKDVDFKVFSGPANDPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVNER
ANGVDGLQSPIVKNIPLDNLNAILDRVGAVDGDIVFFGADKAKIVSEALGALRIKLGHDL
NLLTCEWAPMWVVDFPMFEENDDGSFSALHHPFTAPKCSPAELEANPAGALSRAYDMVLN
GTELGGGSIRIHRKEMQQAVFRLLGINEAEQEEKFGFLLDALKYGAPPHGGLAFGLDRLV
MLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLRETPKAE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcagccattattgcggccaactgaacgagaccctggaaggtcaggaaatcacc
ctttgcggatgggttcaccgtcgccgcgaccacggcggggtgatcttcctcgatatccgt
gatcgtgatggtctggcccaagtggtgttcgaccctgaccgcgccgagagcttcgccgcc
gctgaccgcgtgcgcagcgagtacgtcgtgaagatcaccggtaaggttcgcctgcgtccg
gcgggtgccgtgaacaagaacatggcgtccggcggcatcgaagtgctgggttacgagttg
gaagtgctgaacgaatcggaaaccccgccgttcccactcaacgaatactccgacgtgggc
gaagaaacccgcctgcgctatcgcttcctggacctgcgtcgtccggaaatggccgagaag
ctgcgcctgcgttcgcgcatgactaccagcatccgtcgtttcctcgacgagaacggcttc
ctggatgtcgaaaccccgatcctgacccgggccaccccggaaggcgcgcgtgactacctg
gtgcctagccgtacccacgccggttctttctttgctctgccgcaatcgccgcaactgttc
aagcaattgctgatggtggccggcttcgaccgttactaccagatcgccaagtgcttccgc
gatgaagacctgcgcgccgaccgccagccggaattcacccagatcgacatcgagaccagt
ttcctcgatgaaaaagagatcatgggcctcaccgaacaaatgatccgcaacctgttcaag
gaagtgctggacctggagttcggcgacttcccgcacatgaccttcgaagaagccatgcgc
cgctacggttccgataagccagacctgcgtaacccgctggaactggtggacgtggccgac
cagctcaaggacgtcgacttcaaggtgttcagcggcccggccaacgacccgaaatgccgc
atcgccgccctgcgcgtgcctggcggcgcgagcatgccgcgcaagcagatcgacgactac
accaagttcgtcggcatctacggtgccaagggcctggcgtacatcaaggtcaacgagcgc
gccaacggtgttgacggcctgcaatcgccgatcgtgaaaaacattccgctggacaacctg
aacgcgatcctcgaccgcgtcggtgcagtcgacggtgacatcgtgttctttggcgccgac
aaggccaagatcgtcagcgaagccttgggcgcgctgcggatcaagctgggtcacgacctg
aacctgctgacctgcgaatgggccccgatgtgggtcgttgacttcccgatgttcgaagag
aacgacgacggcagcttcagcgccttgcaccacccgttcaccgcgccgaagtgctcgccg
gccgagctggaagccaacccggccggcgccctgtcccgcgcctacgacatggtgctcaac
ggcaccgagctgggtggcggttcgatccgtatccaccgcaaagagatgcagcaagcggtc
ttccgcctgttgggcatcaacgaagcggaacaggaagagaagttcggcttcctgctcgac
gccctgaaatacggcgcgccgccgcacggtggcttggcgttcggcttggaccgcctggtg
atgttgatgaccggcgcccagtcgatccgtgaagtgattgccttcccgaaaacccagagc
gctgcggacgtcatgacccaggctccgggtgtggtggatgccaaggcgctgcgcgagctg
cacatccgcctgcgcgagacgccgaaggctgagtaa
DBGET
integrated database retrieval system
