Pseudomonas marginalis: U0037_24650
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Entry
U0037_24650 CDS
T10241
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pmab Pseudomonas marginalis
Pathway
pmab01501
beta-Lactam resistance
pmab02020
Two-component system
Module
pmab_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U0037_24650
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
U0037_24650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmab02000
]
U0037_24650
01504 Antimicrobial resistance genes [BR:
pmab01504
]
U0037_24650
Transporters [BR:
pmab02000
]
Other transporters
Pores ion channels [TC:
1
]
U0037_24650
Antimicrobial resistance genes [BR:
pmab01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
U0037_24650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
WQD71207
LinkDB
All DBs
Position
5401713..5403005
Genome browser
AA seq
430 aa
AA seq
DB search
MRVMKWSMIALAVSAGTSQFAMASAQDDSKGFIEDSTASILTRALYFSRDRRNQGAEQSR
IEETGLGFHGLFSSGYTQGTIGVGVDVIGLLGVKLDSGKGRAGTGLFPEGSDGRSQDDYS
KAGAAVKFRISNTVLKVGDQYTTAPVFASDDSRLLPELPQGVSITSNEIKDLKLEAGHFT
SIVAQDQTYRDSIGSSEPGSKRGLRDANFVGGVYSWTPEITTSLYYSKVEDYWKKLYANV
NWTHALSDDQSVAVDFNIYDTKSDGAGLVRADKDSTTKLDNRAFSLQGAYTIGAHTFTLA
AQKVSGDGQYGYGVDGGGTIFLANSIARSDFNAEDEKSYQARYDLNMATFGIPGLSFMTR
YVKGTGANTSTTNNGKEWERDIEAKYVIQSGPAKDLSLRVRQATYRSSDQVYSGSLDELR
LIAQYPLNIL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatgaagtggagcatgatcgccctggctgtttcagcaggcacctcgcagttc
gcaatggcgtccgcccaggacgattccaagggctttatcgaagacagtaccgccagcatt
ctgacgcgtgccttgtacttcagccgtgaccgccgtaaccaaggtgcggagcaaagccgt
atcgaagaaaccggtctgggcttccacggtctcttcagctcgggctacacccaaggcacc
atcggtgtcggtgtcgatgtcatcggcctgctgggcgttaaactcgacagcggcaagggc
cgcgccggtaccggtctgttcccagagggttccgacggccgttcgcaggacgactattcc
aaagcaggcgctgccgtgaagttccgtatttccaatacggtcctcaaggtcggtgatcaa
tacactaccgctccagtgttcgcctccgatgacagccgcttgctgccggaactgccgcaa
ggcgtttccatcaccagcaacgaaatcaaagacctgaaactggaagcgggtcacttcacc
tcgatcgttgcccaggatcaaacctaccgcgacagtatcggcagctccgaaccaggctcg
aaacgtggcctgcgtgacgccaacttcgtgggcggcgtttacagctggacgccagagatc
accaccagcctctactactccaaagtggaagactactggaagaagctctacgccaacgtg
aactggacccacgcacttagcgatgaccaatccgtggctgtcgacttcaacatctacgac
accaagagcgacggcgccggcctggtacgtgctgacaaagacagcacgaccaaactcgac
aaccgtgcgttcagcttgcaaggtgcgtacaccattggcgctcacaccttcaccctggcg
gcgcagaaagtcagcggcgacggccaatacggttatggcgtagacggcggcggcacgatt
ttcctggccaactccatcgctcgttccgacttcaacgctgaagacgagaagtcctaccag
gctcgctatgacctgaacatggcaacctttggcattccgggcctgagcttcatgactcgt
tatgtgaaaggtaccggcgccaacacctctaccactaacaacggtaaagagtgggaacgc
gatatcgaagccaaatacgtgatccagagcggcccagccaaagacctgagcttgcgcgta
cgtcaagcgacctatcgctcgtctgatcaggtttactcgggttctctcgacgaactgcgt
ctgatcgcgcaatacccgctgaacatcttgtaa
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