Pseudomonas marginalis: U0037_25295
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Entry
U0037_25295 CDS
T10241
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
pmab Pseudomonas marginalis
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmab03009
]
U0037_25295 (der)
Ribosome biogenesis [BR:
pmab03009
]
Prokaryotic type
GTPases
U0037_25295 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
Ras
AAA_22
DUF5906
ABC_tran
NOG1
AAA_24
cobW
AAA_18
NTPase_1
SRP54
SRPRB
AAA_14
RHD3_GTPase
Motif
Other DBs
NCBI-ProteinID:
WQD71329
LinkDB
All DBs
Position
complement(5552826..5554295)
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AA seq
489 aa
AA seq
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MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI
SGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYLVANKI
DNIDPEQARAEFSPMGLGDAIPVAGAHGRGITQMLEIALSTFPKDDDEEEEGEEEIVAEG
EEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFERN
DEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF
ALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVEFADIHFISALHGTGVGNLYASV
QNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQIE
KVPKSYVRYLENTYRRVLKLVGTPIRIEFKGGENPYEGNKNTLTDRQVNKKRRLMTHHKK
ADKKRRDKR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggttcccgtaatcgccctggtgggccgacctaacgtcggcaagtccaccttgttcaac
cgcctgaccaggactcgcgacgccatcgtcggcgacttgtccggtctgacccgtgatcgc
caatacggtgaggcaaagtggcaagggcgctcctacattattgtcgacaccggtggtatc
tccggtgacgagcatggcatggatgaaaagatggccgagcagtcgctgctggccattgaa
gaagccgatgtcgtgttgttcctggtggacgcccgtgcgggctacaccgctgccgaccag
atgatcggcgagcacctgcgcaagcgcaacaagcgttcctatctggtcgccaacaagatc
gacaacatcgatcctgagcaggcccgtgccgaattcagcccgatgggcctgggcgatgcg
atcccggtcgccggtgcccacggtcgcggcatcacccagatgctggaaattgccctcagc
accttcccgaaggatgacgatgaggaggaagagggtgaagaagagatcgtcgccgaaggt
gaggaagccaagcgcattccgggcccgagtgaaaaagacggtatcaagatcgccatcatc
ggtcgccctaacgtcggcaagtcgaccctggtcaaccgcatgctcggtgaagaccgggtc
atcgtctacgacgaacccggcaccacccgcgacagcatctacatcccgttcgagcgtaac
gacgagaagtacacgctgatcgacaccgccggtgtgcgcaagcgcggcaagatccacgag
gaagttgaaaagttctcggtggtcaaaaccctgcaagcgatcaaagacgccaacgtggtg
atcttcgtgatggacgcccgcgaaggcgtggtggaccacgacctcaacctgctgggcttt
gccctggaagccggtcgagcgttggtcatcgcgatcaacaagtgggacggcatgacgccg
agtgagcgcgatttcgtcaagatcgagctgcagcgccgactgttttttgtcgagttcgcc
gatattcactttatctcggcactgcatggtaccggcgtgggcaacctctacgcgtccgtg
cagaactcgttcaagtccgcggttacccgctggccgaccaaccgcctcacccagatcctg
gaagacgccgttggcgagcacgcgccgccgatggtcaacaaccgccggatcaaactgcgt
tacgcccacttgggcggtgccaacccgccgattatcgtgatccacggtaaccagatcgag
aaggtgccgaagtcctacgtgcgttacctggaaaacacctaccgccgtgtcttgaaactg
gtcggtacgccgatccgtatcgagttcaagggtggcgagaacccgtacgaaggcaacaag
aacacactgacggaccgtcaggtgaacaagaagcgtcgtttgatgactcaccacaagaag
gccgacaagaagcgccgcgacaagcgctga
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