Pseudomonas marginalis: U0037_25310
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Entry
U0037_25310 CDS
T10241
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
pmab Pseudomonas marginalis
Pathway
pmab00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
U0037_25310 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmab01007
]
U0037_25310 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmab03016
]
U0037_25310 (hisS)
Enzymes [BR:
pmab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
U0037_25310 (hisS)
Amino acid related enzymes [BR:
pmab01007
]
Aminoacyl-tRNA synthetase
Class II (A)
U0037_25310 (hisS)
Transfer RNA biogenesis [BR:
pmab03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
U0037_25310 (hisS)
Prokaryotic type
U0037_25310 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2d
tRNA-synt_2
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
WQD71332
LinkDB
All DBs
Position
complement(5556257..5557546)
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AA seq
429 aa
AA seq
DB search
MSKSLQAIRGMNDILPEQTPLWRYFESTVARLLDNYGYKQIRMPIVEFTELFKRSIGEVT
DIVEKEMYTFEDRNGDSLTLRPEGTAACVRAVLEHGLTGGGQPQKLWYIGPMFRHERPQK
GRYRQFHQIGLEVFNLDGPDIDAELIVLTWRLWGVLGIRDAVKLELNSLGTSESRGRYRV
ALVEYLSAHLDKLDEDSQRRLKTNPLRVLDTKNADTQAVLVNAPKMADYLDDESRTHFEG
LKARLDAAGIPYVINPKLVRGLDYYSKTVFEWVTEKLGAQGTVCAGGRYDGLVEQMGGKP
TTGVGFAMGIERLILLLETLEQVPEEISRQVDVYLCAFGEAAELAALALSEKVRDQLPNL
RLQINAGAGSFKSQFKKADKSGALYALILGEDELAQQVIGFKPLRGQGEQQNIAFDALAA
HLATCVVQG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaagtctctgcaagccattcgtggcatgaacgacatcctgccggagcagacgcca
ctgtggcgctacttcgagagcacggtcgcgcgcctgctggataactacggttacaagcag
atccgcatgccgatcgtcgagttcaccgagctgttcaaacgctccatcggtgaagtgacc
gacatcgtcgaaaaagagatgtacacctttgaagaccgtaacggcgactccctgaccctg
cgtccggaaggtactgccgcgtgcgtgcgcgccgtgctcgagcatggcctcaccggtggc
ggccagccgcagaaactgtggtacatcggtccgatgttccgccacgagcgcccgcagaaa
ggtcgttatcgccagtttcaccagatcggcttggaggtgttcaacctcgacggtccggac
atcgacgccgagctgatcgtgctgacctggcgcctgtggggcgtgttgggcatccgcgac
gcggtcaagcttgaactcaacagcctgggcaccagcgaatcccggggccgctaccgcgtt
gccttggttgaatacctgtccgcccacctggacaagttggacgaggacagccagcgccgt
ctgaagaccaacccgttgcgcgtcctcgataccaagaacgccgacacccaggccgtgctg
gtcaacgcgccaaaaatggccgattacctggacgatgaatcccgtacgcacttcgagggc
ctcaaggctcgtctggatgcggccggtattccctacgtgatcaacccgaaactggtgcgt
ggcctcgactactacagcaagaccgtgttcgagtgggtcaccgaaaaactcggcgcccag
ggcaccgtgtgtgccggtggccgctatgacggcctggtcgagcagatgggcggcaagccg
accacgggcgtaggttttgccatgggcatcgagcggctgatcctgctgctcgaaaccctg
gagcaggtcccggaagagatctcccgtcaggtggacgtgtacctgtgcgcctttggcgag
gcggccgaactggcggccctggccctgagcgaaaaagtccgcgaccaactgccgaacctg
cgcctgcagatcaatgccggcgccggcagcttcaagagccaattcaagaaggccgacaag
agcggtgcgctgtatgcactgatcctcggcgaagacgaactggcccagcaagtgataggt
ttcaaacccctgcgtggccagggcgagcaacagaacattgcctttgatgcgctcgccgcg
cacttggccacctgcgtcgtgcagggttga
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