Pseudomonas marginalis: U0037_26335
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Entry
U0037_26335 CDS
T10241
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pmab Pseudomonas marginalis
Pathway
pmab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U0037_26335 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmab03019
]
U0037_26335 (pnp)
03016 Transfer RNA biogenesis [BR:
pmab03016
]
U0037_26335 (pnp)
Enzymes [BR:
pmab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
U0037_26335 (pnp)
Messenger RNA biogenesis [BR:
pmab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
U0037_26335 (pnp)
Transfer RNA biogenesis [BR:
pmab03016
]
Prokaryotic type
tRNA degradation factors
U0037_26335 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
WQD71525
LinkDB
All DBs
Position
complement(5761295..5763400)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVTVLVTVVGAKTADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQQKASSLDMVV
AGTSEAVLMVESEAKELTEDQMLGAVLFAHDEFQVVINAVKELAAEAAKPTWTWAPQPEA
TALLGAIRSEFGAAISDAYTITVKADRYARLGELKDQVVAKLSGEEGQPSSSEVKAAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSISAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGQKFAILT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggttatcaaaaaattccagttcggtcagtcgaccgttaccctcgagacaggc
cgtatcgcccgtcaagcctccggcgcagtgctggttaccgttgacgacgacgtcaccgta
ttggtgaccgttgttggcgccaagaccgctgacccgagcaaaggcttcttccctctttcc
gttcactaccaggaaaagacttacgctgccggtaagatccctggcggtttcttcaagcgc
gaaggccgtccttccgagaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccgctgttcccagaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtttccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctcggcggccctggctatt
tccggcattcctttcgatggcccgatcggcgctgcccgcgtcgccttccacgaaagcacc
ggctacctgctgaacccgacttacgagcagcagaaagcttcgagcctggacatggtcgtt
gccggtacttcggaagccgtgttgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgcggtactgtttgctcacgacgagttccaagtggtgatcaacgccgtc
aaagaactggctgccgaagcggccaagccaacctggacctgggctccacagccagaagcc
accgcactgctgggcgctatccgctccgagttcggcgctgctatctccgacgcctacacc
atcactgtcaaggccgaccgttacgctcgcctgggtgagctgaaggaccaagtcgttgcc
aagctgtccggcgaagaaggccagccttcttccagcgaagtcaaagcagccttcggtgaa
atcgaataccgcaccgttcgcgaaaacatcgttaacggcaagccacgtatcgacggccgc
gacacccgcaccgtgcgcccgctgaacatcgaagtcggcgttctgccgaagactcacggt
tcggccctgttcacccgtggtgaaacccaggcactggttgttgcgaccttgggtactgcc
cgcgacgcacagctgctggacaccctggaaggcgagaaaaaagaccccttcatgctgcac
tacaacttccctccgttctcggtgggcgagtgtggtcgcatgggcggtgctggtcgtcgc
gaaatcggtcacggccgcctggcccgtcgttcgatttcggccatgctgccagccgccgac
gtgttcccgtacaccatccgtgtcgtatcggaaatcactgagtcgaacggttccagctcc
atggcttccgtttgcggtgcttccctggcactgatggacgccggtgtgccgatgaaggcg
ccggttgccggtatcgccatgggtctggttaaagaaggccagaagttcgccatcctgacc
gacatcctgggcgacgaagaccacctgggtgacatggacttcaaagtagccggtaccgcc
aaaggtgtgaccgcgctgcagatggacatcaagatcaaaggcatcaccgaagaaatcatg
gaaatcgctctgggccaagccctggaagcgcgcctgaacatcctcggtcagatgaaccag
atcattggtcagtcgcgtaccgagctgtcggaaaatgctccgaccatgatcgcgatgaaa
atcgacaccgacaaaatccgtgatgttatcggtaaaggcggcgcgaccattcgtgcgatc
tgcgaagaaaccaaggcttcgatcgacatcgaagatgacggttcgatcaagatcttcggc
gaaaccaaggaagctgcagaagccgcgcgtcagcgcgttctgggcatcactgctgaagcc
gagatcggcaagatctacgttggtaaggttgagcgcatcgtcgacttcggcgcattcgtc
aacatcctgccaggcaaagacggtttggttcacatctccatgctgagcgacgctcgcgtt
gagaaagtgaccgacattctgaaagaaggccaggaagtggaagtgctggttctggacgtg
gacaaccgcggccgtatcaagctgtccatcaaggacgtagcagcagcgaaggcttcgggc
gtttaa
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