Pseudomonas marginalis: U0037_26345
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Entry
U0037_26345 CDS
T10241
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pmab Pseudomonas marginalis
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmab03016
]
U0037_26345 (truB)
Enzymes [BR:
pmab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
U0037_26345 (truB)
Transfer RNA biogenesis [BR:
pmab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
U0037_26345 (truB)
Prokaryotic type
U0037_26345 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
WQD71527
LinkDB
All DBs
Position
complement(5763980..5764897)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPIGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLMQLGKTTTTADAEGDVLQVRDVTVGRADIEAALPGFRGEIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAHEGDTARLAVDCSKGTYI
RTLVEDIGEKLGCGAYVAELRRTQAGPFSLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLHFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgcaatgtcagcggcatcattctgctcgacaagccc
attggcttcacctccaatgccgcgttgcagaaagtccgctggctgctcaatgcggagaag
gccgggcacaccggcagccttgaccccctggccaccggcgtactgccgttgtgctttggt
gaggccaccaagttctcgcaatacctgctcgattccgacaaggggtacgaaaccctgatg
caactgggcaagaccaccaccacggccgacgctgaaggtgatgttttgcaggttcgcgac
gtgaccgttggtcgtgctgatattgaagctgctttacccggttttcgtggggaaatcagt
cagataccgccgatgtactcggctctcaagcgtgatggccagccgctctacaagctggca
cgtgcgggcgaagtagtggagcgcgaaccgcgttctgttactattgcgcgcttggaattg
ctcgctcatgaaggcgacactgcccgcttggccgtggactgcagcaaaggcacctatatc
cgtaccctggtggaagatatcggtgaaaagcttggttgcggcgcgtacgttgcagagctg
cgacgcacccaggcaggtccgttcagcctggcccagacggtcacgctggaagagttggaa
gccgtacacgccgaaggggggaacgaagcggttgatcgtttcctgatgccgtcggacagc
ggtctactggattggccattgctgcacttttcggagcacagcgcgttctactggctcaac
ggccaaccggtacgtgccccggacgctccgaagttcggtatggtgcgggtacaggatcat
aacggtcgctttatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcagaatga
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