KEGG   Pseudomonas marginalis: U0037_27025
Entry
U0037_27025       CDS       T10241                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pmab  Pseudomonas marginalis
Pathway
pmab03030  DNA replication
pmab03430  Mismatch repair
pmab03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    U0037_27025
   03430 Mismatch repair
    U0037_27025
   03440 Homologous recombination
    U0037_27025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmab03032]
    U0037_27025
   03400 DNA repair and recombination proteins [BR:pmab03400]
    U0037_27025
Enzymes [BR:pmab01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     U0037_27025
DNA replication proteins [BR:pmab03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     U0037_27025
DNA repair and recombination proteins [BR:pmab03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     U0037_27025
SSDB
Motif
Pfam: RNase_T Rv2179c-like Ribosomal_L26 RNase_H_2
Other DBs
NCBI-ProteinID: WQD71655
LinkDB
Position
complement(5914718..5915329)
AA seq 203 aa
MERIAVIDFETTGITPNSHCRATEIAVVILERGQIVDRYQSLMNAGVRVPGFIEQLTGIS
NAMLRSAPPAERVMNEVNEFVGTTPLMAHNAAFDQKFWDYELGLIRRTRLQKFACSLLLA
RRLMPTAPNHKLGTLNAFAQLPHTGKAHRAMADAEMAANLTAHLAQELRSTHGLRELSHE
LLCTLQKVPAAKINEHLKKHRGF
NT seq 612 nt   +upstreamnt  +downstreamnt
ttggaacgtatagcggtcatcgactttgaaaccaccggcattacgccgaacagtcattgc
cgggccacggagatcgctgtggtcatccttgagcgtggccagatcgtggaccgctaccag
agcctgatgaacgccggcgtgcgcgtgccgggctttatcgaacaactcaccggcatcagc
aacgccatgctgcgcagcgcgccaccggccgagcgggtgatgaacgaagtcaacgaattc
gtcgggaccacgccactgatggcgcacaacgccgcgttcgaccagaaattctgggactac
gaactgggcttgatccgccgcacccgcctgcaaaaattcgcctgctccctgctactggct
cgccgcttgatgcccaccgcgcccaaccacaaactcggcacgctcaacgccttcgcccaa
ctgccccacaccggcaaggctcaccgggcgatggcggatgcggagatggccgccaacctg
accgcgcacctggcccaggaactgcgcagcacccacggcttgcgcgagctatcccacgaa
ctgctgtgcaccttgcagaaagtgccagcggcgaagatcaatgagcacctgaagaagcat
cgcgggttctga

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