Pseudomonas marginalis: U0037_27125
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Entry
U0037_27125 CDS
T10241
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pmab Pseudomonas marginalis
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmab03016
]
U0037_27125 (miaB)
Enzymes [BR:
pmab01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
U0037_27125 (miaB)
Transfer RNA biogenesis [BR:
pmab03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
U0037_27125 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
WQD71674
LinkDB
All DBs
Position
5935921..5937249
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AA seq
442 aa
AA seq
DB search
MAKKLYIETHGCQMNEYDSSRMVDLLGEHQALEVTARAEDADVILLNTCSIRERAQDRVY
SQLGRWRELKLANPDMVIAVGGCVASQEGAAIRDRAPYVDVVFGPQTLHRLPEMIDAARI
TKLPQVDVSFPEIEKFDHLPEPRIDGPSAYVSVMEGCSKYCTFCVVPYTRGEEVSRPFDD
VLSEIIHLAENGVREVTLLGQNVNGYRGLTQDGRLADLAELIRVVAAVDGIERIRYTTSH
PLEFSDSLIQAHAEVPELVKHLHLPVQSGSDRILSAMKRNHTALEYKSKLRKLRAAVPGI
CISSDFIVGFPGETEKDFQQTMKLIEDVGFDFSYSFVYSQRPGTPAADLVDETPEALKKE
RLNALQHRLNQQGFEISRQMVGSTQRILVTDYSKKDPGELQGRTENNRIVNFRCDNPTLI
GQFADVHIDAAQPHSLRGSLLQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagctttacatcgaaacccacggttgccagatgaacgagtacgacagctcg
cgcatggtcgacttgctgggtgaacaccaggccctggaagtcaccgcccgcgccgaagat
gccgacgtgatcctgctcaatacctgctcgatccgcgagcgggcccaggaccgtgtgtac
tcgcagctgggccgctggcgcgaattgaagctggccaacccggacatggtgatcgccgtc
ggcggttgcgtggccagccaggaaggcgccgcgatccgcgaccgcgcgccctatgtcgac
gtggtcttcggcccgcagaccctgcaccgactgccggaaatgatcgacgccgcccgtatc
accaagctgccgcaggttgacgtctcgttcccggaaatcgaaaagttcgaccacttgccc
gagccgcgtatcgacgggccgagcgcctatgtgtcggtaatggaaggctgcagcaagtac
tgcacgttctgcgtggtgccctacacccgtggcgaggaagtcagccggccatttgacgac
gtgctgtcggaaatcatccacctggccgaaaacggcgtgcgcgaagtgaccctgctgggc
cagaacgtcaacggctatcgcggcctgacccaggacggccgcctggccgacttggcggag
ctgatccgcgtggtcgcagcggtggacggtatcgagcggattcgctacaccacctcgcac
ccgctggagttctccgacagcctcatccaggcccacgccgaagtgccggaactggtcaag
cacctgcacttgccggtgcagtcgggttcggaccgcattttgtcagcgatgaagcgcaac
cacaccgcactggaatacaaatccaaactgcgcaaactgcgcgcggcggtgcccggcatc
tgcatcagctcggacttcatcgtcggcttccccggtgaaaccgagaaagacttccagcag
accatgaagctgatcgaagacgtcggtttcgacttttcctactcgttcgtctacagccag
cgccccggcaccccggcggccgatcttgtggatgaaaccccggaagcgctgaaaaaagag
cgtctcaacgccttgcaacatcgcttgaaccagcagggtttcgagatcagccgacaaatg
gtcggttccacccaacgcatcctggtcaccgactactcgaaaaaagacccgggtgaactg
cagggccgtaccgagaacaaccgaatcgtaaacttccgttgcgacaatccgaccctgatc
ggccagtttgccgatgtgcacatcgatgcggctcagccccattcgttgcgtgggtcgttg
ttgcaataa
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