KEGG   Pseudomonas marginalis: U0037_27465
Entry
U0037_27465       CDS       T10241                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pmab  Pseudomonas marginalis
Pathway
pmab00740  Riboflavin metabolism
pmab01100  Metabolic pathways
pmab01110  Biosynthesis of secondary metabolites
pmab01240  Biosynthesis of cofactors
pmab02024  Quorum sensing
Module
pmab_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pmab00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    U0037_27465 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    U0037_27465 (ribD)
Enzymes [BR:pmab01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     U0037_27465 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     U0037_27465 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Phage_Gp84 Inv-AAD
Other DBs
NCBI-ProteinID: WQD71739
LinkDB
Position
complement(6002715..6003851)
AA seq 378 aa
MNSPSAEQAVLDAHYMARALELARKGLYTTHPNPRVGCVIVRDGQVVGEGWHVRTGEPHA
EVHALRAAGDKARGATAYVTLEPCSHYGHTPPCADALVSAGLARVVAAMQDPNPEVAGRG
MQRLAQAGIDVRSGVLESEARALNRGFLKRMEQGLPFVRVKLAMSLDGRTAMASGESQWI
TGPAARAAVQRLRAEASVVLTGADTVLADGARLTVRAAELGLDDATTALAMSRPPLRVLI
DGRLRVPLNAPFFKAGPALVITCVTAENQFPRGPECLVVPGVEGQVDLRSALVALAARGV
NDVLVEAGPSLAGAFAQQGLVDEYVIFVAGKFLGSAARPLLDWPLDKLADAPQLKITEMR
AVGDDWRVTAIPVPAASV
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgaattcaccctctgccgaacaagctgtgctcgacgcccattacatggcccgcgccctc
gaactggcgcgcaagggtctgtacaccacccaccccaaccctcgggtgggctgcgtgatt
gtgcgcgatgggcaggtcgtcggcgaaggctggcacgtgcgcaccggcgagccccatgcc
gaagttcatgccctgcgcgctgccggtgacaaggcgcgcggcgccaccgcctatgtgacc
ctcgaaccttgcagccactatgggcacaccccgccgtgcgccgatgcgctggtgagtgcc
gggttggcgcgggtggtcgcggcgatgcaggaccctaacccggaagtcgccgggcgcggc
atgcagcgcctggcccaggccgggatcgacgtgcgcagcggtgtgttggaaagtgaagcg
cgggccctcaacagagggttcctcaagcgcatggagcagggcctgccgtttgtgcgggtc
aagctggcgatgagcctggacggccgcaccgcgatggccagcggcgaaagccaatggatc
accggccccgccgcccgcgctgccgtacagcgcctgcgcgccgaggccagcgtggtgctg
accggcgccgatacggtgctggccgacggtgcacgcctgaccgtgcgcgccgccgaactc
ggcctggatgacgccaccaccgccctggccatgtcgcgcccgccattgcgcgtgctgatc
gacggccgcctgcgagtgccgctcaacgcgccgttcttcaaggctggcccggcgttggtc
atcacctgcgtgaccgccgaaaatcagttcccccgtggccctgagtgcctggtggtgccg
ggtgtcgaaggccaggtcgacttgcgctcggcactggtcgcgctggctgcgcgtggcgtc
aacgacgtgctggtggaagctggtccaagcctggcgggtgcgtttgcccaacaaggcctg
gtagacgaatacgtgatattcgtcgcaggcaagttcctcggctccgccgcccggcctttg
ctggactggccgcttgataaactggccgacgccccccaactcaagatcactgaaatgcgc
gctgtaggcgacgactggcgggtcactgccatccctgtgccagcagcgagcgtataa

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