KEGG   Pseudomonas marginalis: U0037_27525
Entry
U0037_27525       CDS       T10241                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pmab  Pseudomonas marginalis
Brite
Enzymes [BR:pmab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     U0037_27525
    5.6.2.6  RNA 3'-5' helicase
     U0037_27525
DNA repair and recombination proteins [BR:pmab03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    U0037_27525
SSDB
Other DBs
NCBI-ProteinID: WQD71751
LinkDB
Position
6012236..6016495
AA seq 1419 aa
MNLPESTDTALTGFHPAVSTWFRSTFPSVTGAQAQAWPLIRQRQSTLIAAPTGSGKTLTA
FLAVLDDLVHQGLANGGELPDETLVVYVSPLKALSNDIQINLQNPLAGITEHLRNLGLPP
LAIRTAVRTGDTPQKDRALMRKRPPHILVTTPESLYVLLGSDSGRQMLASTRTVIIDEIH
AIAAGKRGSHLALSLERLQGLCAEPLMRIGLSATQKPIDAVSRFLVGSGRACAIVDIGHA
RPRDLDIEVPPVPLSAVMANDVWERVYDRLAELAREHRTTLIFVNTRRLAERLARHLSER
LGKTAVAAHHGSLAKEMRLDAEQRLKGGELQVLIATASLELGIDIGDVDLVCQIGSPGSI
NGFLQRVGRSRHQVGGTPKGRLFATTRDDLIECAALLDCVRRGELDTLQIPVAPLDVLAQ
QIIAEVSAQEWSEQALLALIHRAAPYATLDERHYQALLQMLSDGYNGRQGIRSAYLHRDA
LTRTLRGRRGAKLTAVTSGGTIPDNADYSVLLEPQSLNIGSVNEDFAVESIAGDIFQLGN
TSYRILRVEAGKVRVEDAHGQPPTIPFWLGEAPGRSHELSAAVARLQGQMDALLSATPGD
LHAAQDWLTDTLGLNRASAEQILDYLARARLALSALPSQDTLIMERFFDASGGTQLIIHT
PFGSRVNRAWGLALRKRFCRTFNVELQAAASENAIVLSLSTSHSFELDEVWRYLNSQSAE
HILIQAVLDAPLFGVRWRWNAGVALALPRYTGGRKVAPQIQRMKSEDLIASVFPDQIACL
ENLAGEREVPEHPLVEQTLDDCLHEAMDSEGWLALLRRMEHGEVRLISRDLPAPSPMAAE
ILSARPYTFLDDAPLEERRTQAVLNRRWSDPQSTDDLGALDADAIAGVREEAWPAPNGPD
EMHEALMSLACIADNEVTPQWATWLHALAQSGRAYQLHTHLHTRLWVAVERLSCVQTIYP
GNVPLLPGFDEPWTVEEAVTEVLRARLGGFGPLSLIEIAAPLALPVADVTQALARLEHEG
YVLRGHFSPGATQEQWCERHLLARIHRYTVKRLRREIEPVALQDFMRFLFDWQHLSDGTR
GQGSAMLPQIVGQFEGYAAATSAWDSDLLSARLKDYSSTWLDELCRSGKLVWTRLSNKTS
AMALRSTPVVLLPRNQVGLWSGLTEPTDATTLSPKAQKVHQALRDHGALFFDELVHEAHL
LRSELETALQELVGAGVVNADSFAGLRALTTPASKRQARSSRRGRGAFIGGMDDAGRWAL
IRRPSTAAGPPSAETLEHVAMTLLRRYGVVFWRLLEREAEWLPSWRELLRTFHRLEARGE
IRGGRFVSGLAGEQFALPEAIPLLREVRRRPHDGSLIAVCGADPLNLVGTLLPGTKVPAV
SGNRIVYRDGLPAAVMVAGKQQVLVEVDRQAVQERLIRH
NT seq 4260 nt   +upstreamnt  +downstreamnt
atgaaccttcctgaatccaccgacaccgcattgaccggcttccaccccgccgtcagcacc
tggttccgcagcaccttcccctcggtgacaggcgcccaggcccaggcatggccgctgatc
cgccagcgccaatcaacactgatcgccgcgcccaccggctccggcaagacgctcacagcg
ttcctggcggtgctggatgacttggtccaccaaggcctggccaacggcggtgaactaccg
gatgaaaccctggtggtctatgtgtcgccactcaaggcgctgtccaacgacatccagatc
aacctgcaaaacccgctggccgggatcactgagcatctgcggaacctgggcctgccgccg
ctggccatccgcaccgccgtgcgcaccggtgacaccccgcaaaaagaccgcgcactgatg
cgcaagcgcccgccgcatatcctggtgaccaccccggaatcgctctacgtgctgctgggc
tcggactccggccgacagatgctcgccagcacgcgcacggtgatcatcgatgaaatccac
gccatcgccgccggcaaacgtggcagccacctggccttgagcctggaacgcctgcaaggc
ttgtgcgccgagccactgatgcgcatcggcttgtcggccacgcaaaagcccatcgacgcg
gtgtcgcggttcctcgtcggcagcggccgggcgtgcgcgattgtggatatcggccacgcc
cgcccgcgcgacctggatatcgaggtgccgcccgtgccgctctctgcggtgatggccaac
gatgtgtgggagcgggtctacgaccgcctcgccgagttggcccgcgaacaccgtaccacg
ctgatttttgtcaacacccggcgcctggccgagcgcctggcgcggcatttgagcgagcgc
ctgggcaaaaccgccgtggccgcccaccacggcagcctggccaaggaaatgcgcctggac
gccgaacagcgcctcaagggcggcgagctgcaggtgctgatcgccaccgcgtccctggag
ttggggattgatatcggcgatgtcgatctggtttgccagattggctcgcccggctccatc
aacggctttctgcaaagagtcggtcgctcccgccaccaggtgggtggcacgcccaaggga
cgactgttcgccaccacccgcgacgacctgattgaatgcgccgccctgctcgactgcgtg
cgccggggcgaactcgacacgctgcagattcccgtggcgcccctggatgtactggcccag
cagatcatcgccgaggtcagcgcccaggaatggtccgagcaggccttgctggcgctcatc
caccgcgccgcgccctacgccacgctggatgagcgccactaccaggcactgctgcaaatg
ctctccgacggttacaacggtcgccagggcatccgcagcgcctacctgcaccgcgacgcc
ctgactcgcaccctgcgcggtcgacggggcgccaagctgaccgccgtcaccagtggcggc
accatccccgacaacgccgactacagcgtgttgctcgaaccccagagcctgaacatcggc
agcgtcaacgaagacttcgcggtggaaagcatcgccggggatatcttccagctgggcaac
acctcgtatcgcatcttgcgggtcgaagccggcaaagtgcgcgtcgaggacgcccatggc
caaccgccgaccatccccttctggctcggtgaggcgccggggcgcagccacgaattgtca
gcggcggtggcgcgccttcaaggtcagatggacgcgctgctcagcgccacgccgggtgac
ctgcacgccgcacaggattggcttaccgacaccctcggcctgaaccgcgccagcgccgag
cagatcctcgattacctggcccgcgctcgcctggccctgagtgcgttgccgtcccaggac
acgttgatcatggagcggtttttcgacgcgtccggtggcactcaactgatcatccacacg
ccgttcggcagccgcgtcaaccgcgcctggggcctggccctgcgcaagcgtttttgccgc
acgttcaatgtcgaattgcaggcggcggccagtgaaaatgcaatcgtgctgtcgctgtca
accagccacagtttcgagctggacgaagtgtggcgttacctcaatagccagagtgccgag
cacatcctgatccaggcggtgctggatgcgccgctgtttggcgtgcgctggcgctggaat
gcgggggtggcgctggcgttgccgcgctataccggggggcgcaaagtggcgccgcagatt
cagcgcatgaaaagcgaagacctgattgccagcgtcttccccgaccagatcgcttgcctg
gaaaacctcgccggcgagcgcgaggtgcctgaacacccgctggtcgagcaaacgctcgac
gactgcctgcacgaagccatggacagcgagggttggcttgcgctgttgcggcgcatggaa
catggcgaggtgcgcctgatcagccgcgacctgcccgcgccctcgcccatggccgcagaa
atcctcagcgcccgcccctacacctttctcgacgatgcccccctggaagagcgccgcacc
caggccgtgctcaaccggcgctggagcgacccgcagagcaccgacgacctcggcgcactg
gatgcggatgccatcgccggcgtgcgcgaagaagcctggccggcgcccaacggaccggac
gaaatgcatgaggcgttgatgagcctggcgtgcatcgccgataacgaagtcacgccgcaa
tgggcgacttggctgcacgcattggcccagagtggccgcgcctatcaactgcacactcac
ttacacacccgcctgtgggtcgccgtcgaacgcctgagttgtgtgcagacgatctacccc
ggcaacgtgccgttgctgcccggcttcgatgagccctggaccgttgaggaggccgtcacg
gaagtgcttcgcgcgcgcctcggtgggtttggcccgctgagcctgatcgagatcgccgcg
cccctggccttgccggtggcggatgtcactcaggcactggcccgcctggagcatgaaggc
tacgtgctgcgcgggcatttcagccccggcgccacccaggagcaatggtgcgaacgccat
ctgctggcgcgcattcatcgttacacggttaagcgcctacgccgggaaatcgagccggtg
gcgctgcaggacttcatgcgttttctgttcgattggcagcatttgtccgacggcacccgt
ggccagggcagcgcgatgttgccgcagatcgtcgggcagttcgaaggttacgccgccgcc
acttccgcctgggacagcgatttgctcagtgcgcggctcaaggattactcctcgacctgg
ctcgatgagttatgccgcagcggcaaactggtatggacgcgcttgagcaacaagaccagc
gccatggcattgcgcagcactccggtggtgttgctgccacgcaaccaagtgggactgtgg
agcggactgaccgaacccaccgacgccaccacgctgtcgcccaaggcgcagaaggtgcat
caagccctgcgcgaccacggcgcgctgttttttgatgaactggtgcatgaagcccactta
ctgcgcagcgaactggaaaccgctttgcaggaactggtcggtgccggtgtggtgaacgcc
gacagctttgccgggttgcgtgcgctgaccacccccgcgagcaaacgccaggcgcgcagc
agtcggcgcgggcgcggcgcgtttatcggcggtatggacgatgcggggcgttgggcgctg
atccgacgcccgtcgactgccgcaggtccgccttccgccgagaccctggagcatgtggcg
atgaccttgctgcgccgctatggcgtggtgttctggcgcttgctggagcgcgaggcggag
tggctgccgagctggcgcgagttgctgcgcactttccatcggctggaggcgcgcggggag
attcggggtgggcggtttgtcagtggtttggcgggggaacagtttgcgttgccggaggcg
attccgttgctgcgtgaagtgcggcgtcgaccccatgatgggagtttgattgcggtgtgt
ggcgcagacccgttgaacctggtgggcacgctgttaccgggcaccaaggtgccggcggtg
agtggcaatcgcattgtgtaccgggatgggttgcccgcggcggtcatggtggcgggcaag
cagcaggtgttagtagaggtggatcggcaggcggtgcaggagaggctgatcaggcattga

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