Pseudomonas marginalis: U0037_27840
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Entry
U0037_27840 CDS
T10241
Symbol
birA
Name
(GenBank) bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
pmab Pseudomonas marginalis
Pathway
pmab00780
Biotin metabolism
pmab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
U0037_27840 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmab03000
]
U0037_27840 (birA)
Enzymes [BR:
pmab01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
U0037_27840 (birA)
Transcription factors [BR:
pmab03000
]
Prokaryotic type
Helix-turn-helix
Other families
U0037_27840 (birA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
HTH_1
BPL_LplA_LipB_2
BPL_C
GntR
HTH_AsnC-type
HTH_24
K-box
LplA-B_cat
Motif
Other DBs
NCBI-ProteinID:
WQD71809
LinkDB
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Position
complement(6067235..6068194)
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AA seq
319 aa
AA seq
DB search
MLTLLKLLKDGRFHSGEALGAALGVSRSAVWKQLQHLEAELNLSIHKVRGKGYQLASPLV
FLSAEGIAMNAPVLAWPVHISDSIDSTNAEALRLVDAGCAAPFLVLAEQQTAGRGRRGRK
WVSPFAQNVYYSLVLRIESGLRQLEGLSLVVGLAVMQALRESGVRGAALKWPNDVLVGQK
KIAGILLELVGDPADICHVVLGIGINVNMQRADEVDQQWTSVLLETGSSVDRNALVAQLG
VQLQRYLERHREGGFVALQEEWEQSHAWQGRSVSLIAGVNQVDGVVLGVDRQGALRLSVE
GVEKIYSGGELSLRLRDDS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgttgttaaaacttctgaaagatggacgattccactccggagaagcacttggt
gctgccctgggtgtcagccgtagtgctgtctggaagcagctccagcaccttgaggctgaa
ttgaatctgtccattcataaggttcgtggcaagggatatcagttggcgtcaccgctggtg
ttcttgagtgctgaaggtatcgcgatgaatgcgcccgtcttggcatggcccgttcatatc
tctgattccattgactccacgaatgccgaagctttgcgccttgttgatgctggatgtgcg
gcgccgttcctggtgcttgccgagcagcaaaccgcgggaaggggcagaagagggcgaaag
tgggtcagtccgttcgcacaaaatgtttattacagccttgtattgcgcattgagtctggc
cttcggcaattggagggcctaagtctcgttgtgggcttggcggtgatgcaggctttacgc
gagtcaggcgtgcgtggggcggcactgaaatggccaaacgatgtgctggtagggcagaag
aagatcgccgggattttgctggagttggtaggagacccggctgatatctgtcacgttgtc
ctcggaataggcataaatgtgaacatgcagagggctgacgaggtggatcagcaatggact
tcggtgctgcttgagacaggctcttctgttgatcgcaatgctctggtggcgcaattgggt
gtgcagctgcagcgctaccttgaacgacatcgggagggtggttttgtcgcacttcaagag
gagtgggagcagagtcacgcttggcaggggcggtcggtgtctctcattgcgggtgtcaac
caggtcgatggggttgtactgggtgtagaccgtcagggggcgttgcgtttgagtgttgag
ggcgttgagaaaatatacagtggtggtgagttaagcctgaggttgcgtgatgattcttga
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